RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 FAM107AO95990 144 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 ZKSCAN8Q15776 578 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-232ENST00000535094 SLC51AQ86UW1 340 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 SPATS2Q86XZ4 545 aaKnown RBP17.35■□□□□ 0.37
MCF2L-232ENST00000535094 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 PVALEFA0A1B0GWK0 134 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 GRID2IPA4D2P6 1211 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 PPP2R2AP63151 447 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 DENND2CQ68D51 928 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 TTBK2Q6IQ55 1244 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 INTS5Q6P9B9 1019 aaKnown RBP17.35■□□□□ 0.37
MCF2L-232ENST00000535094 KCNV1Q6PIU1 500 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 BAP1Q92560 729 aa17.35■□□□□ 0.37
MCF2L-232ENST00000535094 MMTAG2Q9BU76 263 aaKnown RBP17.35■□□□□ 0.37
MCF2L-232ENST00000535094 MYO5AQ9Y4I1 1855 aaKnown RBP17.34■□□□□ 0.37
MCF2L-232ENST00000535094 GSTTP1A0A1W2PQM5 241 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 EPB41P11171 864 aaKnown RBP17.34■□□□□ 0.37
MCF2L-232ENST00000535094 KCNMA1Q12791 1236 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 CAVIN3Q969G5 261 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 MRRFQ96E11 262 aaKnown RBP17.34■□□□□ 0.37
MCF2L-232ENST00000535094 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 CTTNBP2NLQ9P2B4 639 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
MCF2L-232ENST00000535094 MYH13Q9UKX3 1938 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 SSU72P8A0A1W2PR75 194 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 TNFAIP3P21580 790 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 FIGNQ5HY92 759 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 MFSD14BQ5SR56 506 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 TBC1D9BQ66K14 1250 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 METTL13Q8N6R0 699 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 PNMA5Q96PV4 448 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 FMO2Q99518 471 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 FGFBP2Q9BYJ0 223 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 GCNT4Q9P109 453 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 NEBLO76041 1014 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 PRLRP16471 622 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 RASA1P20936 1047 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 NEDD9Q14511 834 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 LRRC14Q15048 493 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 GRIK5Q16478 980 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 NBPF9Q3BBW0 867 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 IQCKQ8N0W5 287 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 GLG1Q92896 1179 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 PKD2L1Q9P0L9 805 aa17.34■□□□□ 0.37
MCF2L-232ENST00000535094 ZNF219Q9P2Y4 722 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-232ENST00000535094 STAT1P42224 750 aa17.33■□□□□ 0.37
MCF2L-232ENST00000535094 GLYCTKQ8IVS8 523 aa17.33■□□□□ 0.37
MCF2L-232ENST00000535094 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.37
MCF2L-232ENST00000535094 HVCN1Q96D96 273 aa17.33■□□□□ 0.37
MCF2L-232ENST00000535094 SEC16BQ96JE7 1060 aa17.33■□□□□ 0.37
MCF2L-232ENST00000535094 VEZTQ9HBM0 779 aa17.33■□□□□ 0.37
MCF2L-232ENST00000535094 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.37
MCF2L-232ENST00000535094 TLR2O60603 784 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 FLT3P36888 993 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 CDK17Q00537 523 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 MTMR3Q13615 1198 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 BANK1Q8NDB2 785 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 THOC1Q96FV9 657 aaKnown RBP17.33■□□□□ 0.36
MCF2L-232ENST00000535094 SUGP1Q8IWZ8 645 aaKnown RBP17.33■□□□□ 0.36
MCF2L-232ENST00000535094 CUL5Q93034 780 aa17.33■□□□□ 0.36
MCF2L-232ENST00000535094 PURBQ96QR8 312 aaKnown RBP17.33■□□□□ 0.36
MCF2L-232ENST00000535094 INTS9Q9NV88 658 aaKnown RBP17.33■□□□□ 0.36
MCF2L-232ENST00000535094 DCDC2CA8MYV0 355 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 GJC1P36383 396 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 SLC35G1Q2M3R5 365 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 CCDC105Q8IYK2 499 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 SLC24A3Q9HC58 644 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 DNM3Q9UQ16 869 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 DAAM1Q9Y4D1 1078 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 FAM13AO94988 1023 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 MMEP08473 750 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 SKOR1P84550 965 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 TCP10Q12799 353 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 CCDC197Q8NCU1 140 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 AFPP02771 609 aaKnown RBP17.32■□□□□ 0.36
MCF2L-232ENST00000535094 QPCTQ16769 361 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 FBXO33Q7Z6M2 555 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 SFR1Q86XK3 245 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 PARP9Q8IXQ6 854 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 MYCT1Q8N699 235 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 RAPGEF5Q92565 580 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 DDX20Q9UHI6 824 aaKnown RBP17.32■□□□□ 0.36
MCF2L-232ENST00000535094 FLT1P17948 1338 aa17.32■□□□□ 0.36
MCF2L-232ENST00000535094 FAM196BA6NMK8 535 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 CCDC63Q8NA47 563 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 GEMIN8Q9NWZ8 242 aaKnown RBP17.31■□□□□ 0.36
MCF2L-232ENST00000535094 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-232ENST00000535094 OPLAHO14841 1288 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 SLC30A10Q6XR72 485 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 ZNF571Q7Z3V5 609 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-232ENST00000535094 PSMD1Q99460 953 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■■□□ 14.6
MCF2L-232ENST00000535094 BAZ2AQ9UIF9 1905 aaKnown RBP17.31■□□□□ 0.36
MCF2L-232ENST00000535094 MARF1Q9Y4F3 1742 aaKnown RBP17.31■□□□□ 0.36
MCF2L-232ENST00000535094 GNA14O95837 355 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 UCHL3P15374 230 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 PEX19P40855 299 aa17.31■□□□□ 0.36
MCF2L-232ENST00000535094 CUL1Q13616 776 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms