RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SPATA33Q96N06 139 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 USP26Q9BXU7 913 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 ALDH8A1Q9H2A2 487 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 HIPK3Q9H422 1215 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 BCAS3Q9H6U6 928 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 PCDHB9Q9Y5E1 797 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 CYP46A1Q9Y6A2 500 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 LTBP2Q14767 1821 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 UMODL1Q5DID0 1318 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 CNTNAP5Q8WYK1 1306 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 NOP56O00567 594 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 MEIS2O14770 477 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 CD4P01730 458 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 UBA1P22314 1058 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 MRPS9P82933 396 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 AKAP17AQ02040 695 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 SP2Q02086 613 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 GHRHRQ02643 423 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 STK3Q13188 491 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 MFSD5Q6N075 450 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 KCNV1Q6PIU1 500 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 RUFY3Q7L099 469 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 Q7L0L9 218 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 CYFIP1Q7L576 1253 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 SLC43A3Q8NBI5 491 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 FAM174AQ8TBP5 190 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 KCNB2Q92953 911 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 PHKBQ93100 1093 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 FAM161BQ96MY7 647 aa10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 UPF3BQ9BZI7 483 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 FCF1Q9Y324 198 aaKnown RBP10.24□□□□□ -0.77
CCDC90B-219ENST00000534753 CCDC196A0A1B0GTZ2 297 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 SMCO2A6NFE2 343 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 ADCY7P51828 1080 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 PTK2Q05397 1052 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 PPIGQ13427 754 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 PTGISQ16647 500 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 HSDL1Q3SXM5 330 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 LRIT3Q3SXY7 679 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 CELF3Q5SZQ8 465 aaKnown RBP10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 UTP14CQ5TAP6 766 aaKnown RBP10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 NLRX1Q86UT6 975 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 DEFB123Q8N688 67 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 C7orf31Q8N865 590 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 SCLYQ96I15 445 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 SLC26A6Q9BXS9 759 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 EHMT1Q9H9B1 1298 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 TMEM260Q9NX78 707 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 PCDHA6Q9UN73 950 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 PCDHA8Q9Y5H6 950 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 KIAA1217Q5T5P2 1943 aa10.23□□□□□ -0.77
CCDC90B-219ENST00000534753 STXBP3O00186 592 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 FIBPO43427 364 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 SUPT20HL2P0C7V6 817 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 TGFB3P10600 412 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 ZNF76P36508 570 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 KIAA0753Q2KHM9 967 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 PCNX4Q63HM2 1172 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 ZNF365Q70YC5 407 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 DEFB128Q7Z7B8 93 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 DEPDC4Q8N2C3 294 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 ARMC2Q8NEN0 867 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 PPTC7Q8NI37 304 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 ADAM32Q8TC27 787 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 KAT2BQ92831 832 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 UIMC1Q96RL1 719 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 NOC4LQ9BVI4 516 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 TRAIPQ9BWF2 469 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 SEZ6LQ9BYH1 1024 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 RIC8AQ9NPQ8 531 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 PDRG1Q9NUG6 133 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 HDAC6Q9UBN7 1215 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 MYH7BA7E2Y1 1941 aa10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 RANBP2P49792 3224 aaKnown RBP10.22□□□□□ -0.77
CCDC90B-219ENST00000534753 SPATA31C2B4DYI2 1134 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 CPLX1O14810 134 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 ATP9BO43861 1147 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 STAM2O75886 525 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 SCG2P13521 617 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 TOB2Q14106 344 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 NEDD9Q14511 834 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 GDF6Q6KF10 455 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 NFRKBQ6P4R8 1299 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 C16orf59Q7L2K0 433 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 OTOP2Q7RTS6 562 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 BAP1Q92560 729 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 FOXJ1Q92949 421 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 INPP4AQ96PE3 977 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 ARHGAP9Q9BRR9 750 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 KATNAL1Q9BW62 490 aa10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 FTOQ9C0B1 505 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCDC90B-219ENST00000534753 WNT8AQ9H1J5 351 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms