RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 RRN3P2A6NIE6 340 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 ATG7O95352 703 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 CHRNA1P02708 482 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 ARP10275 920 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 PSMA5P28066 241 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 EVCP57679 992 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 MGAT3Q09327 533 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 ITGB3BPQ13352 177 aaPredicted RBP21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 GRIK4Q16099 956 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 RUFY4Q6ZNE9 571 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 PLPPR4Q7Z2D5 763 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 TNPO1Q92973 898 aaKnown RBP21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 TOP1MTQ969P6 601 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 PGBD1Q96JS3 809 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 SDF4Q9BRK5 362 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 TUBE1Q9UJT0 475 aa21.49■■□□□ 1.03
NDUFS3-213ENST00000534716 PRPF3O43395 683 aaKnown RBP21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 CYP3A4P08684 503 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 MARK3P27448 753 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 ACTR2P61160 394 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 PKN1Q16512 942 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 RSPH3Q86UC2 560 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 MYOCDQ8IZQ8 938 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 IFIH1Q9BYX4 1025 aaKnown RBP21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 AZI2Q9H6S1 392 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 TMEM260Q9NX78 707 aa21.48■■□□□ 1.03
NDUFS3-213ENST00000534716 IGKV6D-21A0A0A0MT36 114 aa21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 SLC26A2P50443 739 aa21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 MICALL1Q8N3F8 863 aa21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 CCDC12Q8WUD4 166 aaPredicted RBP21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 SUGCTQ9HAC7 445 aa21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 NAP1L2Q9ULW6 460 aaPredicted RBP21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 COL4A6Q14031 1691 aa21.47■■□□□ 1.03
NDUFS3-213ENST00000534716 MYO9BQ13459 2157 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 RBAK-RBAKDNI3L0D1 243 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 INSRRP14616 1297 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 NTRK3Q16288 839 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 KRT40Q6A162 431 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 FAM117BQ6P1L5 589 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 COG5Q9UP83 839 aa21.46■■□□□ 1.03
NDUFS3-213ENST00000534716 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 FAM86B1E9PN63 330 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 FAM86B2P0C5J1 330 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 STAT5BP51692 787 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 PLCB4Q15147 1175 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 RNF26Q9BY78 433 aaPredicted RBP21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 C6orf50Q9HD87 102 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 SQORQ9Y6N5 450 aa21.45■■□□□ 1.02
NDUFS3-213ENST00000534716 IFNAR1P17181 557 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 GNA11P29992 359 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 PDIA3P30101 505 aaKnown RBP21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 ZNF76P36508 570 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 LPIN1Q14693 890 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 AAK1Q2M2I8 961 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 JAKMIP3Q5VZ66 844 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 ABHD15Q6UXT9 468 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 DNAJB3Q8WWF6 145 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 SAMD11Q96NU1 681 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 MICAL3Q7RTP6 2002 aa21.44■■□□□ 1.02
NDUFS3-213ENST00000534716 DHX15O43143 795 aaKnown RBP21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 CCNE2O96020 404 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 GHRP10912 638 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 FBXO47Q5MNV8 452 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 RUFY3Q7L099 469 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 PLA2G4DQ86XP0 818 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 REXO1Q8N1G1 1221 aaKnown RBP21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 GDPD5Q8WTR4 605 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 ZSWIM6Q9HCJ5 1215 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 TRPC6Q9Y210 931 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 PCDHA2Q9Y5H9 948 aa21.43■■□□□ 1.02
NDUFS3-213ENST00000534716 POTEB3A0JP26 581 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 TNFRSF10AO00220 468 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 ADAMTS3O15072 1205 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 BMP1P13497 986 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 COL9A1P20849 921 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 COL4A4P53420 1690 aaPredicted RBP21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 IGBP1P78318 339 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 MRPS6P82932 125 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 PRRC2BQ5JSZ5 2229 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 IER5Q5VY09 327 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 POTEBQ6S5H4 581 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 TSHZ1Q6ZSZ6 1077 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 BICD2Q8TD16 824 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 ADAMTS19Q8TE59 1207 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 PHKBQ93100 1093 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 YME1L1Q96TA2 773 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 C17orf80Q9BSJ5 609 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 TBC1D22BQ9NU19 505 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 CDY2AQ9Y6F7 541 aa21.42■■□□□ 1.02
NDUFS3-213ENST00000534716 BDP1A6H8Y1 2624 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 SMIM35A0A1B0GVV1 85 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 IPO5O00410 1097 aaKnown RBP21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 CIITAP33076 1130 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 TFF2Q03403 129 aa21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 SKIV2LQ15477 1246 aaKnown RBP21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 FAM43BQ6ZT52 329 aaPredicted RBP21.41■■□□□ 1.02
NDUFS3-213ENST00000534716 NME8Q8N427 588 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms