RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 SUPT20HL1Q3ZLR7 823 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 METTL24Q5JXM2 366 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 PRAMEF13Q5VWM6 474 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 KLHDC4Q8TBB5 520 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 ZNF296Q8WUU4 475 aaPredicted RBP6.46□□□□□ -1.38
ATM-224ENST00000534625 HSPA12BQ96MM6 686 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 TDRD3Q9H7E2 651 aaKnown RBP6.46□□□□□ -1.38
ATM-224ENST00000534625 VEZTQ9HBM0 779 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 ZNF70Q9UC06 446 aaPredicted RBP6.46□□□□□ -1.38
ATM-224ENST00000534625 TLR6Q9Y2C9 796 aa6.46□□□□□ -1.38
ATM-224ENST00000534625 TNRC18O15417 2968 aaPredicted RBP6.45□□□□□ -1.38
ATM-224ENST00000534625 UNCXA6NJT0 531 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 FGFR2P21802 821 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 CRKP46108 304 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 ZP2Q05996 745 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 SREBF2Q12772 1141 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 CHAF1AQ13111 956 aaPredicted RBP6.45□□□□□ -1.38
ATM-224ENST00000534625 IKZF1Q13422 519 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 LETMD1Q6P1Q0 360 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 WNK4Q96J92 1243 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 FAM161BQ96MY7 647 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 TEPSINQ96N21 525 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 TJP2Q9UDY2 1190 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 TACC3Q9Y6A5 838 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 CAPN6Q9Y6Q1 641 aa6.45□□□□□ -1.38
ATM-224ENST00000534625 HTTP42858 3142 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 MANSC4A6NHS7 340 aaPredicted RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 EYA2O00167 538 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 FKTNO75072 461 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 ZBTB48P10074 688 aaPredicted RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 INHBEP58166 350 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 HDLBPQ00341 1268 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 TAGLNQ01995 201 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 TNFAIP1Q13829 316 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 PUM3Q15397 648 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 PKN2Q16513 984 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 CAVIN4Q5BKX8 364 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 SFRP5Q5T4F7 317 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 ATG9AQ7Z3C6 839 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 VPS37DQ86XT2 251 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 TBC1D22AQ8WUA7 517 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 FAM84AQ96KN4 292 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 MRIQ9BWK5 157 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 TMEM39BQ9GZU3 492 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 ATP13A1Q9HD20 1204 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 SMC4Q9NTJ3 1288 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 TPX2Q9ULW0 747 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
ATM-224ENST00000534625 KIF16BQ96L93 1317 aa6.44□□□□□ -1.38
ATM-224ENST00000534625 TCP10L2B9ZVM9 353 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 FRAT2O75474 233 aaPredicted RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 IFIT1P09914 478 aaKnown RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 CT47B1P0C2W7 299 aaPredicted RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 SOX10P56693 466 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 PSMD2Q13200 908 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 TAF1CQ15572 869 aaPredicted RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 LCE5AQ5TCM9 118 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 CDKAL1Q5VV42 579 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 APOBEC3HQ6NTF7 200 aaKnown RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 CILP2Q8IUL8 1156 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 ANKRD13AQ8IZ07 590 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 MFSD4AQ8N468 514 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 PHC3Q8NDX5 983 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 LPIN2Q92539 896 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 ZDHHC15Q96MV8 337 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 PTPN18Q99952 460 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 DPH2Q9BQC3 489 aaPredicted RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 NOC4LQ9BVI4 516 aaKnown RBP6.43□□□□□ -1.38
ATM-224ENST00000534625 MIR1-1HGQ9H1L0 117 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 SUGT1Q9Y2Z0 365 aa6.43□□□□□ -1.38
ATM-224ENST00000534625 CENPFP49454 3210 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 ARAP2Q8WZ64 1704 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 H3BS24 57 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 CCER2I3L3R5 266 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 CIAO1O76071 339 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 CBX7O95931 251 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 PGRP06401 933 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 UBTFL1P0CB47 393 aaPredicted RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 PDIA4P13667 645 aaKnown RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 SLC5A1P13866 664 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 RARSP54136 660 aaKnown RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 CACNB3P54284 484 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 TSNAXIP1Q2TAA8 658 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 FKBP1CQ5VVH2 108 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 FBXO46Q6PJ61 603 aaPredicted RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 HHIPL2Q6UWX4 724 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 CDH24Q86UP0 819 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATM-224ENST00000534625 TEKT1Q969V4 418 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 ACSF2Q96CM8 615 aaPredicted RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 TMEM87BQ96K49 555 aa6.42□□□□□ -1.38
ATM-224ENST00000534625 API5Q9BZZ5 524 aaKnown RBP6.42□□□□□ -1.38
ATM-224ENST00000534625 SIL1Q9H173 461 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms