RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	RAB3IP	Q96QF0	476 aa	Predicted RBP	17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	C19orf81	C9J6K1	198 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	PPFIA1	Q13136	1202 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	CEP85L	Q5SZL2	805 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	PPP2R3C	Q969Q6	453 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	MCUR1	Q96AQ8	359 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	SAT1	P21673	171 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	RCAN1	P53805	252 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	RNF219	Q5W0B1	726 aa	Predicted RBP	17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	PNMA8A	Q86V59	439 aa	Predicted RBP	17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	COG2	Q14746	738 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	B4GALNT4	Q76KP1	1039 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	MTR	Q99707	1265 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	PIDD1	Q9HB75	910 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	PCDHB6	Q9Y5E3	794 aa		17.03	■□□□□ 0.32
NCAPD3-213	ENST00000534532	GOLGA8IP	A6NC78	632 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	GOLGA8J	A6NMD2	632 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	MCF2L	O15068	1137 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	ECE1	P42892	770 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	ARHGAP4	P98171	946 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	USP17L6P	Q6QN14	398 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	GTF3C2	Q8WUA4	911 aa	Predicted RBP	17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	ACTN1	P12814	892 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	RECQL	P46063	649 aa	Predicted RBP	17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	YWHAG	P61981	247 aa	Known RBP eCLIP	17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	LRRC63	Q05C16	580 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	ZNF568	Q3ZCX4	644 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	PADI6	Q6TGC4	694 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	TAB3	Q8N5C8	712 aa	Predicted RBP	17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	DESI2	Q9BSY9	194 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	SGK1	O00141	431 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	MRFAP1L1	Q96HT8	127 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	ANGPTL3	Q9Y5C1	460 aa		17.02	■□□□□ 0.32
NCAPD3-213	ENST00000534532	NDUFAB1	O14561	156 aa		17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	STX2	P32856	288 aa		17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RASSF7	Q02833	373 aa		17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GRM4	Q14833	912 aa		17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SF3B3	Q15393	1217 aa	Known RBP	17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ALX1	Q15699	326 aa		17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ADAT2	Q7Z6V5	191 aa	Known RBP	17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	UBN1	Q9NPG3	1134 aa		17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PRDM5	Q9NQX1	630 aa	Predicted RBP	17.02	■□□□□ 0.31
NCAPD3-213	ENST00000534532	KBTBD13	C9JR72	458 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	P4HB	P07237	508 aa	Known RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	TROVE2	P10155	538 aa	Known RBP eCLIP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CTNNA1	P35221	906 aa	Known RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NECTIN1	Q15223	517 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	MARCH10	Q8NA82	808 aa	Predicted RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NEDD1	Q8NHV4	660 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PIGO	Q8TEQ8	1089 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	WDR46	O15213	610 aa	Known RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	STYK1	Q6J9G0	422 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	DNAAF3	Q8N9W5	541 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RWDD2A	Q9UIY3	292 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RCOR1	Q9UKL0	485 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	QARS	P47897	775 aa	Known RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	QRICH1	Q2TAL8	776 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	KRT1	P04264	644 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PSMD6	Q15008	389 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	BANK1	Q8NDB2	785 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PDE1B	Q01064	536 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	EHHADH	Q08426	723 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ORC2	Q13416	577 aa	Predicted RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NKX1-1	Q15270	411 aa	Predicted RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SWSAP1	Q6NVH7	229 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CEP57	Q86XR8	500 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ANKRD13C	Q8N6S4	541 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	LBHD1	Q9BQE6	289 aa	Predicted RBP	17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	HOMER3	Q9NSC5	361 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	PPP2R2C	Q9Y2T4	447 aa		17.01	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NBPF26	B4DH59	902 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RNF40	O75150	1001 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ENTPD3	O75355	529 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NBPF10	Q6P3W6	841 aa	Known RBP	17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	TBC1D10C	Q8IV04	446 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NBPF15	Q8N660	670 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GDAP1	Q8TB36	358 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	LPAR1	Q92633	364 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	DPH5	Q9H2P9	285 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GABBR1	Q9UBS5	961 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	GFPT2	O94808	682 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RPS12	P25398	132 aa	Known RBP	17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SLC15A2	Q16348	729 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SCN4B	Q8IWT1	228 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CCDC13	Q8IYE1	715 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SMYD4	Q8IYR2	804 aa	Predicted RBP	17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	KCTD6	Q8NC69	237 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	NCAPG	Q9BPX3	1015 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CALN1	Q9BXU9	219 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	THAP9	Q9H5L6	903 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	BCAP29	Q9UHQ4	241 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SPATA31A5	Q5VU36	1347 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	SPATA31A7	Q8IWB4	1347 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	BNIP3L	O60238	219 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CASP14	P31944	242 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RSBN1L	Q6PCB5	846 aa	Predicted RBP	17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	CAPN12	Q6ZSI9	719 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	ARHGEF18	Q6ZSZ5	1173 aa		17	■□□□□ 0.31
NCAPD3-213	ENST00000534532	RAB44	Q7Z6P3	723 aa	Predicted RBP	17	■□□□□ 0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms