RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 ADCY4Q8NFM4 1077 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 OSBP2Q969R2 916 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 UTP4Q969X6 686 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 PPP1R14AQ96A00 147 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 RCC1LQ96I51 464 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 BRIP1Q9BX63 1249 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 PRDM14Q9GZV8 571 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 PCDH12Q9NPG4 1184 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 WHRNQ9P202 907 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 EMC9Q9Y3B6 208 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 MRPS23Q9Y3D9 190 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 DMDP11532 3685 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 FAM186AA6NE01 2351 aa6.1□□□□□ -1.43
ECHDC1-223ENST00000534442 SPEGQ15772 3267 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 hCG_2014768A0A024R1R8 64 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 A0A087WZG4 1122 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 CCDC163A0A0D9SF12 145 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 FAM95CA0A1B0GW59 222 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 UBE2Q2LH0YL09 131 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 PPM1BO75688 479 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 FGFR1P11362 822 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 SMAD3P84022 425 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 AMPD3Q01432 767 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 SNW1Q13573 536 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 ARHGEF6Q15052 776 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 AAK1Q2M2I8 961 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 TXNRD3Q86VQ6 643 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 DIS3LQ8TF46 1054 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 BRF1Q92994 677 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 CDCA5Q96FF9 252 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 LTV1Q96GA3 475 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 SCARF2Q96GP6 870 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 HNRNPABQ99729 332 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 DUSP23Q9BVJ7 150 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 SSBP4Q9BWG4 385 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 NOP58Q9Y2X3 529 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 PCDHB12Q9Y5F1 795 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 COL4A6Q14031 1691 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 GVINP1Q7Z2Y8 2422 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 VPS13AQ96RL7 3174 aa6.09□□□□□ -1.43
ECHDC1-223ENST00000534442 LRRC37A2A6NM11 1700 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 PCDH11XQ9BZA7 1347 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 PCDH11YQ9BZA8 1340 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 POLR2AP24928 1970 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 IGF2BP3O00425 579 aaKnown RBP eCLIP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 PRODHO43272 600 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 RFPL3O75679 317 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 SGPL1O95470 568 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 VIL1P09327 827 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 SRGNP10124 158 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 ITGA4P13612 1032 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 FKBP1BP68106 108 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 IGBP1P78318 339 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 PABPC4Q13310 644 aaKnown RBP eCLIP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 NFKBIBQ15653 356 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 GPAT2Q6NUI2 795 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 NECAB2Q7Z6G3 386 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 TRIM59Q8IWR1 403 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 DHX37Q8IY37 1157 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 SYTL5Q8TDW5 730 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 GATA6Q92908 595 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 NINJ1Q92982 152 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 DCPSQ96C86 337 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 MASTLQ96GX5 879 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 Q96M66 194 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 CDC6Q99741 560 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 TMX1Q9H3N1 280 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 CD320Q9NPF0 282 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 CGGBP1Q9UFW8 167 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 FBXL21Q9UKT6 434 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 SUGT1Q9Y2Z0 365 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 FHOD1Q9Y613 1164 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 CD163L1Q9NR16 1453 aa6.08□□□□□ -1.44
ECHDC1-223ENST00000534442 MAP3K19Q56UN5 1328 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 CDHR2Q9BYE9 1310 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 HELZ2Q9BYK8 2649 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 ZSWIM8A7E2V4 1837 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 PLD2O14939 933 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 TFRCP02786 760 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 CDK11BP21127 795 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 IBSPP21815 317 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 CRKLP46109 303 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 SF1Q15637 639 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 RGL3Q3MIN7 710 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 PAOXQ6QHF9 649 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 NSMFQ6X4W1 530 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 BEND4Q6ZU67 534 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 ASCL5Q7RTU5 278 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 TMC3Q7Z5M5 1100 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 RPUSD2Q8IZ73 545 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 BTN2A2Q8WVV5 523 aa6.07□□□□□ -1.44
ECHDC1-223ENST00000534442 RMDN1Q96DB5 314 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms