RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SMIM10L2BP0DMW5 78 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 TXKP42681 527 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 SLC26A2P50443 739 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 SWSAP1Q6NVH7 229 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 TTC12Q9H892 705 aaPredicted RBP27.24■■□□□ 1.95
SIPA1-210ENST00000534406 HDAC6Q9UBN7 1215 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 GTF2IRD1Q9UHL9 959 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 PCDHA12Q9UN75 941 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 CEP290O15078 2479 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 KAT6AQ92794 2004 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 B4GALT4O60513 344 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 SPIRE1Q08AE8 756 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 NCAPH2Q6IBW4 605 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 PDXDC2PQ6P474 469 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 ZSCAN16Q9H4T2 348 aaPredicted RBP27.23■■□□□ 1.95
SIPA1-210ENST00000534406 PDLIM7Q9NR12 457 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 GABBR1Q9UBS5 961 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 MYH15Q9Y2K3 1946 aa27.23■■□□□ 1.95
SIPA1-210ENST00000534406 LAD1O00515 517 aa27.22■■□□□ 1.95
SIPA1-210ENST00000534406 CD4P01730 458 aa27.22■■□□□ 1.95
SIPA1-210ENST00000534406 PTGDRQ13258 359 aa27.22■■□□□ 1.95
SIPA1-210ENST00000534406 TRPV6Q9H1D0 765 aa27.22■■□□□ 1.95
SIPA1-210ENST00000534406 RNPEPQ9H4A4 650 aa27.22■■□□□ 1.95
SIPA1-210ENST00000534406 PRDM5Q9NQX1 630 aaPredicted RBP27.22■■□□□ 1.95
SIPA1-210ENST00000534406 TRMT13Q9NUP7 481 aaKnown RBP27.22■■□□□ 1.95
SIPA1-210ENST00000534406 EML1O00423 815 aa27.21■■□□□ 1.95
SIPA1-210ENST00000534406 ANP32AP39687 249 aaKnown RBP27.21■■□□□ 1.95
SIPA1-210ENST00000534406 FAAP100Q0VG06 881 aa27.21■■□□□ 1.95
SIPA1-210ENST00000534406 GDF6Q6KF10 455 aaPredicted RBP27.21■■□□□ 1.95
SIPA1-210ENST00000534406 C4orf32Q8N8J7 132 aa27.21■■□□□ 1.95
SIPA1-210ENST00000534406 PRKAG2Q9UGJ0 569 aa27.21■■□□□ 1.95
SIPA1-210ENST00000534406 TRPC6Q9Y210 931 aa27.21■■□□□ 1.95
SIPA1-210ENST00000534406 NOD1Q9Y239 953 aa27.21■■□□□ 1.95
SIPA1-210ENST00000534406 MAFBQ9Y5Q3 323 aaPredicted RBP27.21■■□□□ 1.95
SIPA1-210ENST00000534406 C17orf102A2RUQ5 167 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 ZSCAN22P10073 491 aaPredicted RBP27.2■■□□□ 1.94
SIPA1-210ENST00000534406 PPFIA1Q13136 1202 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 PLCB4Q15147 1175 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 TMEM266Q2M3C6 531 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 CKAP2LQ8IYA6 745 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 TNPO1Q92973 898 aaKnown RBP27.2■■□□□ 1.94
SIPA1-210ENST00000534406 ATP6V0A1Q93050 837 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 TMEM39AQ9NV64 488 aa27.2■■□□□ 1.94
SIPA1-210ENST00000534406 TRIP12Q14669 1992 aaPredicted RBP27.2■■□□□ 1.94
SIPA1-210ENST00000534406 BMP15O95972 392 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 HOXC8P31273 242 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 EPHA7Q15375 998 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 PTGISQ16647 500 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 UGCGQ16739 394 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 ATP8B4Q8TF62 1192 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 FAM167AQ96KS9 214 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 TBX21Q9UL17 535 aa27.19■■□□□ 1.94
SIPA1-210ENST00000534406 ZMYND8Q9ULU4 1186 aaPredicted RBP27.19■■□□□ 1.94
SIPA1-210ENST00000534406 NRCAMQ92823 1304 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 POTEB3A0JP26 581 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 POTEMA6NI47 508 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 GNAT1P11488 350 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 PRPHP41219 470 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 ATP2C1P98194 919 aaPredicted RBP27.18■■□□□ 1.94
SIPA1-210ENST00000534406 PRKCEQ02156 737 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 PKP1Q13835 747 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 FOXD4L5Q5VV16 416 aaPredicted RBP27.18■■□□□ 1.94
SIPA1-210ENST00000534406 POTEBQ6S5H4 581 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 LMBR1Q8WVP7 490 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 FOXD4L4Q8WXT5 416 aaPredicted RBP27.18■■□□□ 1.94
SIPA1-210ENST00000534406 CEP131Q9UPN4 1083 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 LTBP2Q14767 1821 aa27.18■■□□□ 1.94
SIPA1-210ENST00000534406 F13A1P00488 732 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 GRIK4Q16099 956 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 FAM173BQ6P4H8 233 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 SH3RF1Q7Z6J0 888 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 BANK1Q8NDB2 785 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 NEK9Q8TD19 979 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 SETD4Q9NVD3 440 aa27.17■■□□□ 1.94
SIPA1-210ENST00000534406 KIAA0355O15063 1070 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 ZNF862O60290 1169 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 HBP1O60381 514 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 OATP04181 439 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 P4HBP07237 508 aaKnown RBP27.16■■□□□ 1.94
SIPA1-210ENST00000534406 SYN1P17600 705 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 ATP4AP20648 1035 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 TECP42680 631 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 FXR2P51116 673 aaKnown RBP eCLIP27.16■■□□□ 1.942e-6■■■■□ 24.4
SIPA1-210ENST00000534406 PSMC5P62195 406 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 HIC1Q14526 733 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 BBXQ8WY36 941 aaPredicted RBP27.16■■□□□ 1.94
SIPA1-210ENST00000534406 RAB34Q9BZG1 259 aa27.16■■□□□ 1.94
SIPA1-210ENST00000534406 COL1A2P08123 1366 aa27.15■■□□□ 1.94
SIPA1-210ENST00000534406 TRIM43BA6NCK2 446 aa27.15■■□□□ 1.94
SIPA1-210ENST00000534406 DKC1O60832 514 aaKnown RBP eCLIP27.15■■□□□ 1.94
SIPA1-210ENST00000534406 CYP2C9P11712 490 aa27.15■■□□□ 1.94
SIPA1-210ENST00000534406 INSRRP14616 1297 aa27.15■■□□□ 1.94
SIPA1-210ENST00000534406 QARSP47897 775 aaKnown RBP27.15■■□□□ 1.94
SIPA1-210ENST00000534406 ZNF200P98182 395 aaPredicted RBP27.15■■□□□ 1.94
SIPA1-210ENST00000534406 SF3A1Q15459 793 aaKnown RBP27.15■■□□□ 1.94
SIPA1-210ENST00000534406 TRIM43Q96BQ3 446 aaPredicted RBP27.15■■□□□ 1.94
SIPA1-210ENST00000534406 CTAGE1Q96RT6 745 aa27.15■■□□□ 1.94
SIPA1-210ENST00000534406 LXNQ9BS40 222 aa27.15■■□□□ 1.94
SIPA1-210ENST00000534406 RRN3P2A6NIE6 340 aa27.14■■□□□ 1.94
SIPA1-210ENST00000534406 IGBP1P78318 339 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms