RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 CHGBP05060 677 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 ASGR2P07307 311 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 SRGAP2BP0DMP2 458 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 ARP10275 920 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 RPS6P62753 249 aaKnown RBP7.63□□□□□ -1.19
CD44-237ENST00000534082 SBK1Q52WX2 424 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 NAALADL2Q58DX5 795 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 RNF207Q6ZRF8 634 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 KLHL23Q8NBE8 558 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 RDH13Q8NBN7 331 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 DNERQ8NFT8 737 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 ZNF689Q96CS4 500 aaPredicted RBP7.63□□□□□ -1.19
CD44-237ENST00000534082 APOL5Q9BWW9 433 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 S1PR5Q9H228 398 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 RANBP17Q9H2T7 1088 aaKnown RBP7.63□□□□□ -1.19
CD44-237ENST00000534082 ZFYVE26Q68DK2 2539 aa7.63□□□□□ -1.19
CD44-237ENST00000534082 SETXQ7Z333 2677 aaKnown RBP7.63□□□□□ -1.19
CD44-237ENST00000534082 SPEGQ15772 3267 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 KIAA1671Q9BY89 1806 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 B4DLN1 442 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 ACTN4O43707 911 aaKnown RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 ADRB1P08588 477 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 SDHBP21912 280 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 TECP42680 631 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 MRPL12P52815 198 aaKnown RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 ATXN1P54253 815 aaKnown RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 SLFN5Q08AF3 891 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 DUSP6Q16828 381 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 RCSD1Q6JBY9 416 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 ANKRD54Q6NXT1 300 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 SYCE2Q6PIF2 218 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 ZC3H14Q6PJT7 736 aaKnown RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 SEPT14Q6ZU15 432 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 ZNF444Q8N0Y2 327 aaPredicted RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 PPTC7Q8NI37 304 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 CLEC4DQ8WXI8 215 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 ATP6V0A1Q93050 837 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 EMID1Q96A84 441 aaPredicted RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 CDCA3Q99618 268 aaPredicted RBP7.62□□□□□ -1.19
CD44-237ENST00000534082 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.62□□□□□ -1.19
CD44-237ENST00000534082 CDH22Q9UJ99 828 aa7.62□□□□□ -1.19
CD44-237ENST00000534082 C17orf102A2RUQ5 167 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 DDX11L8A8MPP1 907 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 TREHO43280 583 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 DGKIO75912 1065 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 TSPY3P0CV98 308 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 TSPY8P0CW00 308 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 HOXD8P13378 290 aaPredicted RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 NPR3P17342 541 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 ATP8B2P98198 1209 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 UBE3CQ15386 1083 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 CCDC96Q2M329 555 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 PAN2Q504Q3 1202 aaKnown RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 Q6ZNB5 142 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 CMTR2Q8IYT2 770 aaKnown RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 TDRD5Q8NAT2 981 aaKnown RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 NEDD1Q8NHV4 660 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 MICAL1Q8TDZ2 1067 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 RIN2Q8WYP3 895 aaPredicted RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 ARHGAP45Q92619 1136 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 RTP3Q9BQQ7 232 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 POMKQ9H5K3 350 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 C1orf115Q9H7X2 142 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 ZNF287Q9HBT7 754 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 SH2B1Q9NRF2 756 aaPredicted RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 PAG1Q9NWQ8 432 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 CDV3Q9UKY7 258 aaKnown RBP7.61□□□□□ -1.19
CD44-237ENST00000534082 TNNQ9UQP3 1299 aa7.61□□□□□ -1.19
CD44-237ENST00000534082 PPFIA3O75145 1194 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 CT47B1P0C2W7 299 aaPredicted RBP7.6□□□□□ -1.19
CD44-237ENST00000534082 GHRP10912 638 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 HOXC8P31273 242 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 SLC16A2P36021 539 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 UBE3AQ05086 875 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 LAMC2Q13753 1193 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 KCNC3Q14003 757 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 SYDE2Q5VT97 1194 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 LLGL2Q6P1M3 1020 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 TMEM184AQ6ZMB5 413 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 ERC1Q8IUD2 1116 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 FAM9BQ8IZU0 186 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 NECTIN4Q96NY8 510 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 PUS7LQ9H0K6 701 aaKnown RBP7.6□□□□□ -1.19
CD44-237ENST00000534082 ERVK-5Q9HDB9 667 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 IL1RAPL2Q9NP60 686 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 STX8Q9UNK0 236 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 MTMR7Q9Y216 660 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 PLXNA4Q9HCM2 1894 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 FRYQ5TBA9 3013 aa7.6□□□□□ -1.19
CD44-237ENST00000534082 CEP295Q9C0D2 2601 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 DCDC2BA2VCK2 349 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 GSG1L2A8MUP6 293 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 ENPP3O14638 875 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 SMIM10L2AP0DMW4 78 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 SMIM10L2BP0DMW5 78 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 TRIM27P14373 513 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 HOXB8P17481 243 aaPredicted RBP7.59□□□□□ -1.19
CD44-237ENST00000534082 TDO2P48775 406 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 LMNB2Q03252 620 aa7.59□□□□□ -1.19
CD44-237ENST00000534082 DMWDQ09019 674 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms