RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 CCDC191Q8NCU4 936 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 DHX38Q92620 1227 aaKnown RBP6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 JAKMIP1Q96N16 626 aaKnown RBP6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 HAUS7Q99871 368 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 KRTAP4-2Q9BYR5 136 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 UPF3BQ9BZI7 483 aaKnown RBP6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 PAXBP1Q9Y5B6 917 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 RBM8AQ9Y5S9 174 aaKnown RBP6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 MRC1P22897 1456 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 SH3TC1Q8TE82 1336 aa6.76□□□□□ -1.33
CLNS1A-212ENST00000533957 FITM1A5D6W6 292 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 CHURC1-FNTBB4DL54 471 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 SLC27A2O14975 620 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 TAF5LO75529 589 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 PHKG2P15735 406 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 TNNI2P48788 182 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 EVCP57679 992 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 PKP1Q13835 747 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 NOLC1Q14978 699 aaKnown RBP eCLIP6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 ZSCAN25Q6NSZ9 544 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 TMC4Q7Z404 712 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 SPPL2CQ8IUH8 684 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 BAHD1Q8TBE0 780 aaPredicted RBP6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 LTV1Q96GA3 475 aaPredicted RBP6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 KREMEN1Q96MU8 473 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 MTA3Q9BTC8 594 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 FSD1Q9BTV5 496 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 SPTLC3Q9NUV7 552 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 REV1Q9UBZ9 1251 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 MTMR6Q9Y217 621 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 TAF1LQ8IZX4 1826 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 QSER1Q2KHR3 1735 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 MEGF6O75095 1541 aa6.75□□□□□ -1.33
CLNS1A-212ENST00000533957 SIPA1L3O60292 1781 aaPredicted RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 SPEF2Q9C093 1822 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 CARMIL3Q8ND23 1372 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 MED23Q9ULK4 1368 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 RBM47A0AV96 593 aaKnown RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 ZBTB7CA1YPR0 619 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 SASH1O94885 1247 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 FAM193AP78312 1265 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 ME3Q16798 604 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 IRF2BP1Q8IU81 584 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 ELOA2Q8IYF1 753 aaPredicted RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 KBTBD3Q8NAB2 608 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 SYTL4Q96C24 671 aaPredicted RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 EAF2Q96CJ1 260 aaPredicted RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 ZNF512BQ96KM6 892 aaPredicted RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 CCDC74BQ96LY2 380 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 FAM161BQ96MY7 647 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 FUCA2Q9BTY2 467 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 RSRP1Q9BUV0 290 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 NUP62CLQ9H1M0 184 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 SLC6A17Q9H1V8 727 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 BICC1Q9H694 974 aaKnown RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 KCND1Q9NSA2 647 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 EBF1Q9UH73 591 aa6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 YBX2Q9Y2T7 364 aaKnown RBP6.74□□□□□ -1.33
CLNS1A-212ENST00000533957 PAPPAQ13219 1627 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 CICQ96RK0 1608 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 H3BQV1 296 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 CCP110O43303 1012 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 PFKFB2O60825 505 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 ADCY5O95622 1261 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 LINC00310P59036 64 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 TPM4P67936 248 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 SNX17Q15036 470 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 PPP2R5BQ15173 497 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 TTF1Q15361 905 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 HSP90AB3PQ58FF7 597 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 TNNI3KQ59H18 835 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 CCDC158Q5M9N0 1113 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 SARM1Q6SZW1 724 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 SND1Q7KZF4 910 aaKnown RBP eCLIP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 COPS6Q7L5N1 327 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 RELL1Q8IUW5 271 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 MYRIPQ8NFW9 859 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 CCDC34Q96HJ3 373 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 SUCLG2Q96I99 432 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 SPATA32Q96LK8 384 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 TMEM74Q96NL1 305 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 MCOLN1Q9GZU1 580 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 TNMDQ9H2S6 317 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 IMPACTQ9P2X3 320 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 RCOR1Q9UKL0 485 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 THRAP3Q9Y2W1 955 aaKnown RBP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 ZNF281Q9Y2X9 895 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 CCDC9Q9Y3X0 531 aaKnown RBP6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 FPGT-TNNI3KV9GXZ4 949 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 C5P01031 1676 aa6.73□□□□□ -1.33
CLNS1A-212ENST00000533957 KAT6BQ8WYB5 2073 aa6.72□□□□□ -1.33
CLNS1A-212ENST00000533957 MYOCOSA0A1B0GUC4 107 aa6.72□□□□□ -1.33
CLNS1A-212ENST00000533957 A0A1W2PQ27 194 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms