RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GRID2IPA4D2P6 1211 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 CEP104O60308 925 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 NR2F2P24468 414 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 PTK2Q05397 1052 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 CUL5Q93034 780 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 RNPC3Q96LT9 517 aaKnown RBP21.2■□□□□ 0.98
CAPN1-226ENST00000533820 DAGLAQ9Y4D2 1042 aa21.2■□□□□ 0.98
CAPN1-226ENST00000533820 TMCO5BA8MYB1 307 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 PSMC6P62333 389 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 PSMD2Q13200 908 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 CCDC65Q8IXS2 484 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 RNF10Q8N5U6 811 aaKnown RBP21.19■□□□□ 0.98
CAPN1-226ENST00000533820 IKZF4Q9H2S9 585 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 PNMA6FA0A0J9YX94 578 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 ERLIN2O94905 339 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 PAK2Q13177 524 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 SLC30A10Q6XR72 485 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 TRIM59Q8IWR1 403 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 TAF4BQ92750 862 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 POLLQ9UGP5 575 aa21.19■□□□□ 0.98
CAPN1-226ENST00000533820 SEC24CP53992 1094 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 ZNF543Q08ER8 600 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 ASPRV1Q53RT3 343 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 ALS2CLQ60I27 953 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 NAV1Q8NEY1 1877 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 MED24O75448 989 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 PLCG2P16885 1265 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 CYP4A11Q02928 519 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 CEP85LQ5SZL2 805 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 GJB7Q6PEY0 223 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 FAM196AQ6ZSG2 479 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 PROM2Q8N271 834 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 LUC7LQ9NQ29 371 aaKnown RBP21.18■□□□□ 0.98
CAPN1-226ENST00000533820 PAX7P23759 505 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 MRPL12P52815 198 aaKnown RBP21.18■□□□□ 0.98
CAPN1-226ENST00000533820 TRAPPC3LQ5T215 181 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 LRRC27Q9C0I9 530 aa21.18■□□□□ 0.98
CAPN1-226ENST00000533820 DDX60LQ5H9U9 1706 aaKnown RBP21.17■□□□□ 0.98
CAPN1-226ENST00000533820 H0YHG0 523 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 SARNPP82979 210 aaKnown RBP21.17■□□□□ 0.98
CAPN1-226ENST00000533820 CAVIN3Q969G5 261 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 SRCAPQ6ZRS2 3230 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 A0A087WUV0 522 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-226ENST00000533820 CYP11B2P19099 503 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 CACNB3P54284 484 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 RPS6KA1Q15418 735 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 MEI1Q5TIA1 1274 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 GBP6Q6ZN66 633 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 ZNF571Q7Z3V5 609 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-226ENST00000533820 HDAC9Q9UKV0 1011 aa21.17■□□□□ 0.98
CAPN1-226ENST00000533820 EP400Q96L91 3159 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 SFI1A8K8P3 1242 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 CLIC2O15247 247 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 PRR16Q569H4 304 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 PRR5LQ6MZQ0 368 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 INPP4AQ96PE3 977 aaPredicted RBP21.16■□□□□ 0.98
CAPN1-226ENST00000533820 DDX47Q9H0S4 455 aaKnown RBP21.16■□□□□ 0.98
CAPN1-226ENST00000533820 GDF3Q9NR23 364 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 ABCB11O95342 1321 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 CETN3O15182 167 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 TTLL1O95922 423 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 CPP00450 1065 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 KCNV1Q6PIU1 500 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 IQCKQ8N0W5 287 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 PLAAQ9Y263 795 aa21.16■□□□□ 0.98
CAPN1-226ENST00000533820 BACH1O14867 736 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 ARSHQ5FYA8 562 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 PPP4R3AQ6IN85 833 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 PIK3R5Q8WYR1 880 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 TSKSQ9UJT2 592 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 RSPH10B2B2RC85 870 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 RBAK-RBAKDNI3L0D1 243 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 RSPH10BP0C881 870 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 BARGINQ6ZT62 677 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 KCTD10Q9H3F6 313 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 PCDHA1Q9Y5I3 950 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 SMARCA1P28370 1054 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 KCNA1Q09470 495 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 TCP10Q12799 353 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 USH1GQ495M9 461 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 NAA35Q5VZE5 725 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 ADAT2Q7Z6V5 191 aaKnown RBP21.15■□□□□ 0.98
CAPN1-226ENST00000533820 SFR1Q86XK3 245 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 NGLY1Q96IV0 654 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 SERPINB13Q9UIV8 391 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 PCDHA2Q9Y5H9 948 aa21.15■□□□□ 0.98
CAPN1-226ENST00000533820 CASP4P49662 377 aa21.14■□□□□ 0.98
CAPN1-226ENST00000533820 ERVK-9P63128 1117 aa21.14■□□□□ 0.98
CAPN1-226ENST00000533820 USP38Q8NB14 1042 aa21.14■□□□□ 0.98
CAPN1-226ENST00000533820 EDEM3Q9BZQ6 932 aa21.14■□□□□ 0.98
CAPN1-226ENST00000533820 TRIM31Q9BZY9 425 aa21.14■□□□□ 0.98
CAPN1-226ENST00000533820 GANQ9H2C0 597 aa21.14■□□□□ 0.98
CAPN1-226ENST00000533820 MAST2Q6P0Q8 1798 aa21.14■□□□□ 0.97
CAPN1-226ENST00000533820 TNRC6CQ9HCJ0 1690 aaKnown RBP21.14■□□□□ 0.97
CAPN1-226ENST00000533820 KDM4FA0A1W2PPD8 638 aa21.14■□□□□ 0.97
CAPN1-226ENST00000533820 MYBP10242 640 aa21.14■□□□□ 0.97
CAPN1-226ENST00000533820 NR1D1P20393 614 aa21.14■□□□□ 0.97
CAPN1-226ENST00000533820 ORC2Q13416 577 aaPredicted RBP21.14■□□□□ 0.97
CAPN1-226ENST00000533820 USP40Q9NVE5 1235 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms