RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 TXKP42681 527 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 PRR16Q569H4 304 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 KRT79Q5XKE5 535 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 PCNX4Q63HM2 1172 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 HAUS3Q68CZ6 603 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 ANKLE1Q8NAG6 615 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 CDK5RAP3Q96JB5 506 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 MTMR9Q96QG7 549 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 TINF2Q9BSI4 451 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 LRWD1Q9UFC0 647 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 PLXNA1Q9UIW2 1896 aa12.29□□□□□ -0.44
CCDC90B-218ENST00000533761 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 KDM3AQ9Y4C1 1321 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 WNT7AO00755 349 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 SLC37A4O43826 429 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 NR3C2P08235 984 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 EIF2AK2P19525 551 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 PDE4DQ08499 809 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 CAMK2BQ13554 666 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 PGM5Q15124 567 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 STXBP2Q15833 593 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 CAMK4Q16566 473 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 MFSD14CQ5VZR4 134 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 HOMEZQ8IX15 550 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 KCTD17Q8N5Z5 321 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 IGSF22Q8N9C0 903 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 CDHR1Q96JP9 859 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 FGD4Q96M96 766 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 PDCD2LQ9BRP1 358 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 CCSER1Q9C0I3 900 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 TMEM60Q9H2L4 133 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 KCNMB3Q9NPA1 279 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 MYH7BA7E2Y1 1941 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 ASTN1O14525 1302 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 FRMPD4Q14CM0 1322 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 RPTORQ8N122 1335 aa12.28□□□□□ -0.44
CCDC90B-218ENST00000533761 MAFGO15525 162 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 MYL1P05976 194 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 EDNRBP24530 442 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 CCND2P30279 289 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 STAT6P42226 847 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 TECP42680 631 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 CCL14Q16627 93 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 GNPTABQ3T906 1256 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 L1TD1Q5T7N2 865 aaKnown RBP12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 KRBA2Q6ZNG9 492 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 RBM43Q6ZSC3 357 aaKnown RBP12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 ARMCX2Q7L311 632 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 VSIG10LQ86VR7 867 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 MORC4Q8TE76 937 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 WDR11Q9BZH6 1224 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 NT5C3AQ9H0P0 336 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 TSPY26PQ9H489 355 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 PTCH2Q9Y6C5 1203 aa12.27□□□□□ -0.44
CCDC90B-218ENST00000533761 EIF3JO75822 258 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 SMC2O95347 1197 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 HMGCRP04035 888 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 SLFN14P0C7P3 912 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 ELNP15502 786 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 GRK4P32298 578 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 UBXN2AP68543 259 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 AMPD3Q01432 767 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 FBXO46Q6PJ61 603 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 NLRX1Q86UT6 975 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 CABP7Q86V35 215 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 PLA2G4DQ86XP0 818 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 TRIB2Q92519 343 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 EPSTI1Q96J88 318 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 LRRC27Q9C0I9 530 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 NAT10Q9H0A0 1025 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 FLRT1Q9NZU1 646 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 FAM86B1E9PN63 330 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 MEIS1O00470 390 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 SNAI1O95863 264 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 IGHA2P01877 340 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 FAM86B2P0C5J1 330 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 CYP2C19P33261 490 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 GRIN1Q05586 938 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 MTMR1Q13613 665 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 SLC9C1Q4G0N8 1177 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 PDILTQ8N807 584 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 ETNPPLQ8TBG4 499 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 DHX58Q96C10 678 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 RIT2Q99578 217 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 ZNF577Q9BSK1 485 aa12.26□□□□□ -0.45
CCDC90B-218ENST00000533761 NRBP1Q9UHY1 535 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms