RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 ZNF302Q9NR11 478 aa18.52■□□□□ 0.56
PACSIN3-210ENST00000533686 MAFBQ9Y5Q3 323 aaPredicted RBP18.52■□□□□ 0.56
PACSIN3-210ENST00000533686 MORC2Q9Y6X9 1032 aaPredicted RBP18.52■□□□□ 0.56
PACSIN3-210ENST00000533686 CAPN15O75808 1086 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 PDIA5Q14554 519 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 LRRC26Q2I0M4 334 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 TMEM266Q2M3C6 531 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 DTHD1Q6ZMT9 781 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 TNPO1Q92973 898 aaKnown RBP18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 CLIC4Q9Y696 253 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 SCN10AQ9Y5Y9 1956 aa18.51■□□□□ 0.55
PACSIN3-210ENST00000533686 MROH7Q68CQ1 1323 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 IGSF9BQ9UPX0 1349 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 P4HBP07237 508 aaKnown RBP18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 TECP42680 631 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 PTPAQ15257 358 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 NCAPH2Q6IBW4 605 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 PDXDC2PQ6P474 469 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 ANKRD33Q7Z3H0 272 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 TOX2Q96NM4 488 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 USP28Q96RU2 1077 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 RAB34Q9BZG1 259 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 GABBR1Q9UBS5 961 aa18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 CIZ1Q9ULV3 898 aaPredicted RBP18.5■□□□□ 0.55
PACSIN3-210ENST00000533686 DKC1O60832 514 aaKnown RBP eCLIP18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 NASPP49321 788 aaPredicted RBP18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 RTP1P59025 263 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 IGSF22Q8N9C0 903 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 NEK9Q8TD19 979 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 ATP6V0A1Q93050 837 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 RNPEPQ9H4A4 650 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 ATP6V1DQ9Y5K8 247 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 STK24Q9Y6E0 443 aa18.49■□□□□ 0.55
PACSIN3-210ENST00000533686 POTEMA6NI47 508 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 ATP4AP20648 1035 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 MARK3P27448 753 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 HOXC8P31273 242 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 QARSP47897 775 aaKnown RBP18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 PSMC5P62195 406 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 SLC39A14Q15043 492 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 PLCB4Q15147 1175 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 IL17AQ16552 155 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 TRIM60Q495X7 471 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 ATP8B4Q8TF62 1192 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 FAM167AQ96KS9 214 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 HSD17B14Q9BPX1 270 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 EIF2AK1Q9BQI3 630 aaKnown RBP18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 FTOQ9C0B1 505 aaKnown RBP eCLIP18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 HDAC6Q9UBN7 1215 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 GTF2IRD1Q9UHL9 959 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 NRCAMQ92823 1304 aa18.48■□□□□ 0.55
PACSIN3-210ENST00000533686 POTEB3A0JP26 581 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 DCDC2CA8MYV0 355 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 ZNF862O60290 1169 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 HBP1O60381 514 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 YEATS4O95619 227 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 CHMP4BP1P59074 171 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 TLE2Q04725 743 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 UGCGQ16739 394 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 FAM47CQ5HY64 1035 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 POTEBQ6S5H4 581 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 FAM126BQ8IXS8 530 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 LINC00301Q8NCQ3 95 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 ERMNQ8TAM6 284 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 BBXQ8WY36 941 aaPredicted RBP18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 POLR3CQ9BUI4 534 aaPredicted RBP18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 LRWD1Q9UFC0 647 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 CFAP45Q9UL16 551 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 ATP11BQ9Y2G3 1177 aa18.47■□□□□ 0.55
PACSIN3-210ENST00000533686 RRN3P2A6NIE6 340 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 SLITRK3O94933 977 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 LYPLA2O95372 231 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 CD4P01730 458 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 GNAT1P11488 350 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 CEBPZQ03701 1054 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 C4orf19Q8IY42 314 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 CKAP2LQ8IYA6 745 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 BANK1Q8NDB2 785 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 DYDC2Q96IM9 177 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 AK8Q96MA6 479 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 ZSWIM4Q9H7M6 989 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 TUFT1Q9NNX1 390 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 NRBP2Q9NSY0 501 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 RGL1Q9NZL6 768 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 TFIP11Q9UBB9 837 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 TRPC6Q9Y210 931 aa18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 SRPRBQ9Y5M8 271 aaKnown RBP18.46■□□□□ 0.55
PACSIN3-210ENST00000533686 C17orf102A2RUQ5 167 aa18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 VWA3AA6NCI4 1184 aa18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 PQBP1O60828 265 aaKnown RBP18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 OATP04181 439 aa18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 INSRRP14616 1297 aa18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 MUTP22033 750 aa18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 RPA1P27694 616 aa18.45■□□□□ 0.54
PACSIN3-210ENST00000533686 LONP1P36776 959 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms