RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 XRCC6P12956 609 aaKnown RBP eCLIP13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 SP2Q02086 613 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 GRM1Q13255 1194 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 CRHR2Q13324 411 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 CTTNQ14247 550 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 NEDD9Q14511 834 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 DHX8Q14562 1220 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 MORN1Q5T089 497 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 ISM2Q6H9L7 571 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 MAMDC4Q6UXC1 1216 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 MSL3Q8N5Y2 521 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 BPIFA3Q9BQP9 254 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 DACH1Q9UI36 760 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 SAMM50Q9Y512 469 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 PCDHA10Q9Y5I2 948 aa13.7□□□□□ -0.22
TGFBR3-211ENST00000533370 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 MYMKA6NI61 221 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 DKC1O60832 514 aaKnown RBP eCLIP13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 CCNE2O96020 404 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 PSAPP07602 524 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 CASP1P29466 404 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 SLC12A3P55017 1021 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 PSMC6P62333 389 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 CYP4A11Q02928 519 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 DPCR1Q3MIW9 517 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 POTEGQ6S5H5 508 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 RNF214Q8ND24 703 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
TGFBR3-211ENST00000533370 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 KLRC4O43908 158 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 AOC2O75106 756 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 RHOBTB3O94955 611 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 ATG7O95352 703 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 BMP6P22004 513 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 MAP2K2P36507 400 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 PSMC5P62195 406 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 ASIC1P78348 528 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 ZNF658Q5TYW1 1059 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 MIS18BP1Q6P0N0 1132 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 ABHD15Q6UXT9 468 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 C11orf57Q6ZUT1 292 aaPredicted RBP13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 ARMCX2Q7L311 632 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 CYFIP1Q7L576 1253 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 DDX12PQ92771 950 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 MAML3Q96JK9 1138 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 LXNQ9BS40 222 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 VTA1Q9NP79 307 aa13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 DDX41Q9UJV9 622 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 DBR1Q9UK59 544 aaKnown RBP13.68□□□□□ -0.22
TGFBR3-211ENST00000533370 A0A087WWV3 80 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 RBM47A0AV96 593 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 HOXC6P09630 235 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 UBA1P22314 1058 aaKnown RBP13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 ERCC5P28715 1186 aaPredicted RBP13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 ACTR2P61160 394 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 PSMD2Q13200 908 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 TTLL4Q14679 1199 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 IQCB1Q15051 598 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 KMT5BQ4FZB7 885 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 ARSHQ5FYA8 562 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 UNC13DQ70J99 1090 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 EEPD1Q7L9B9 569 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 C4orf19Q8IY42 314 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 SCFD2Q8WU76 684 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 USP6NLQ92738 828 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 BCAS3Q9H6U6 928 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 KCND2Q9NZV8 630 aa13.67□□□□□ -0.22
TGFBR3-211ENST00000533370 SYNGAP1Q96PV0 1343 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 BECN2A8MW95 431 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 SUPT20HL2P0C7V6 817 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 CYP11B2P19099 503 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 IRF5Q13568 498 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 CELF3Q5SZQ8 465 aaKnown RBP13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 SWSAP1Q6NVH7 229 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 METTL7BQ6UX53 244 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 OTUD6AQ7L8S5 288 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 CCDC65Q8IXS2 484 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 ATP6V0A1Q93050 837 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 TINF2Q9BSI4 451 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 CFHR5Q9BXR6 569 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 BHMT2Q9H2M3 363 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
TGFBR3-211ENST00000533370 MLXIPQ9HAP2 919 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms