RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 SMC2O95347 1197 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 GGPS1O95749 300 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 IGHA2P01877 340 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 SLC12A3P55017 1021 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 NLRP12P59046 1061 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 SP4Q02446 784 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 MORC3Q14149 939 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 NEDD9Q14511 834 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 DPCR1Q3MIW9 517 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 ANO6Q4KMQ2 910 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 TMEM63BQ5T3F8 832 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 ISM2Q6H9L7 571 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 C11orf57Q6ZUT1 292 aaPredicted RBP17.83■□□□□ 0.45
TRIM3-213ENST00000533309 GIMAP8Q8ND71 665 aaPredicted RBP17.83■□□□□ 0.45
TRIM3-213ENST00000533309 SCFD2Q8WU76 684 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 GSDMAQ96QA5 445 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 RBSNQ9H1K0 784 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 DNM3Q9UQ16 869 aa17.83■□□□□ 0.45
TRIM3-213ENST00000533309 ZBTB39O15060 712 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 EYA4O95677 639 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 RGS2P41220 211 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 PSMC4P43686 418 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 QARSP47897 775 aaKnown RBP17.83■□□□□ 0.44
TRIM3-213ENST00000533309 FCGRTP55899 365 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 CCL14Q16627 93 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 CNNM4Q6P4Q7 775 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 METTL7BQ6UX53 244 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 ABHD15Q6UXT9 468 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 PIGOQ8TEQ8 1089 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 APBA2Q99767 749 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 DNAJC25Q9H1X3 360 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 ZSWIM4Q9H7M6 989 aa17.83■□□□□ 0.44
TRIM3-213ENST00000533309 ATG7O95352 703 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 LYPLA2O95372 231 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 RPN1P04843 607 aaKnown RBP17.82■□□□□ 0.44
TRIM3-213ENST00000533309 TXNP10599 105 aaKnown RBP17.82■□□□□ 0.44
TRIM3-213ENST00000533309 CYP2B6P20813 491 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 AMPD3Q01432 767 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 TTLL4Q14679 1199 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 CELF3Q5SZQ8 465 aaKnown RBP17.82■□□□□ 0.44
TRIM3-213ENST00000533309 CCDC60Q8IWA6 550 aaPredicted RBP17.82■□□□□ 0.44
TRIM3-213ENST00000533309 SYT2Q8N9I0 419 aaPredicted RBP17.82■□□□□ 0.44
TRIM3-213ENST00000533309 TRIML1Q8N9V2 468 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 BHMT2Q9H2M3 363 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 ANO10Q9NW15 660 aa17.82■□□□□ 0.44
TRIM3-213ENST00000533309 MYH11P35749 1972 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 SSBP05455 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRIM3-213ENST00000533309 SUPT20HL2P0C7V6 817 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 CYP11B2P19099 503 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 PSMC5P62195 406 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 SP3Q02447 781 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 COPS5Q92905 334 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 DNAJC19Q96DA6 116 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 NACC1Q96RE7 527 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 ABHD16BQ9H3Z7 469 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 HTTP42858 3142 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 CEP350Q5VT06 3117 aa17.81■□□□□ 0.44
TRIM3-213ENST00000533309 IGSF9BQ9UPX0 1349 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 GSTTP1A0A1W2PQM5 241 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 ZNF862O60290 1169 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 PSAPP07602 524 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 PTGS1P23219 599 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 ADCYAP1R1P41586 468 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 ACVR2BQ13705 512 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 ARSHQ5FYA8 562 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 OLFML2BQ68BL8 750 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 GPBP1Q86WP2 473 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 C4orf19Q8IY42 314 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 DDX12PQ92771 950 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 CENPFP49454 3210 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 IGKV6D-21A0A0A0MT36 114 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 ASIC1P78348 528 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 KCNB1Q14721 858 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 KMT5BQ4FZB7 885 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 GJC2Q5T442 439 aaPredicted RBP17.8■□□□□ 0.44
TRIM3-213ENST00000533309 MIS18BP1Q6P0N0 1132 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 DYMQ7RTS9 669 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 RNF214Q8ND24 703 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 LRRC27Q9C0I9 530 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 MLXIPQ9HAP2 919 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 GABBR1Q9UBS5 961 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 GABRQQ9UN88 632 aa17.8■□□□□ 0.44
TRIM3-213ENST00000533309 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.79■□□□□ 0.44
TRIM3-213ENST00000533309 STBD1O95210 358 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 CYP2C19P33261 490 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 ARHGAP1Q07960 439 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 IRF5Q13568 498 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 HSDL1Q3SXM5 330 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 SWSAP1Q6NVH7 229 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 PCYT2Q99447 389 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 GPR20Q99678 358 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 RUSC1Q9BVN2 902 aa17.79■□□□□ 0.44
TRIM3-213ENST00000533309 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
TRIM3-213ENST00000533309 NPHP3-ACAD11A0A0J9YXS1 232 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 ADCY6O43306 1168 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
TRIM3-213ENST00000533309 XRCC5P13010 732 aaKnown RBP17.78■□□□□ 0.44
TRIM3-213ENST00000533309 YWHABP31946 246 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms