RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PSAPP07602 524 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 HSP90AA1P07900 732 aaKnown RBP13.52□□□□□ -0.25
SSBP3-214ENST00000533209 CYP2C9P11712 490 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 ITGB8P26012 769 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 MARK3P27448 753 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 SFNP31947 248 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 JAK3P52333 1124 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 ZNF200P98182 395 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-214ENST00000533209 SPIRE1Q08AE8 756 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 PPP2R5CQ13362 524 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 PTGISQ16647 500 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 FERMT3Q86UX7 667 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 SLFN12Q8IYM2 578 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 RDM1Q8NG50 284 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 PRDM5Q9NQX1 630 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-214ENST00000533209 ZNF302Q9NR11 478 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 MTMR6Q9Y217 621 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 PCDHB6Q9Y5E3 794 aa13.52□□□□□ -0.25
SSBP3-214ENST00000533209 MAFBQ9Y5Q3 323 aaPredicted RBP13.52□□□□□ -0.25
SSBP3-214ENST00000533209 C17orf102A2RUQ5 167 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 ATP4AP20648 1035 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 SLC26A2P50443 739 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 ADAM17P78536 824 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 UGCGQ16739 394 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 PDXDC2PQ6P474 469 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 BRAPQ7Z569 592 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
SSBP3-214ENST00000533209 SETD4Q9NVD3 440 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 GABBR1Q9UBS5 961 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 PRKAG2Q9UGJ0 569 aa13.51□□□□□ -0.25
SSBP3-214ENST00000533209 UMODL1Q5DID0 1318 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 NRCAMQ92823 1304 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 POTEB3A0JP26 581 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 STX6O43752 255 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 ZNF862O60290 1169 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 TIMP1P01033 207 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 OR52Z1P0C646 297 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 TXKP42681 527 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 RESTQ13127 1097 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 PPFIA1Q13136 1202 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 GRIK4Q16099 956 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
SSBP3-214ENST00000533209 POTEBQ6S5H4 581 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 LMBR1Q8WVP7 490 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
SSBP3-214ENST00000533209 PPP1R12CQ9BZL4 782 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 TTC12Q9H892 705 aaPredicted RBP13.5□□□□□ -0.25
SSBP3-214ENST00000533209 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.5□□□□□ -0.25
SSBP3-214ENST00000533209 PCDHA12Q9UN75 941 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
SSBP3-214ENST00000533209 TREHO43280 583 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 INSRRP14616 1297 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 RAG1P15918 1043 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 CYP2C18P33260 490 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 MAGEA10P43363 369 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-214ENST00000533209 PTGDRQ13258 359 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 PTK7Q13308 1070 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
SSBP3-214ENST00000533209 MARCH8Q5T0T0 291 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 NCAPH2Q6IBW4 605 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 BADQ92934 168 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 ATP6V0A1Q93050 837 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 WNT8BQ93098 351 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 GDF15Q99988 308 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 HIPK3Q9H422 1215 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
SSBP3-214ENST00000533209 MBLAC1A4D2B0 266 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-214ENST00000533209 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 HBP1O60381 514 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 STBD1O95210 358 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 GNAT1P11488 350 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 MDM2Q00987 491 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-214ENST00000533209 PRKCEQ02156 737 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 RBL2Q08999 1139 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 BECN1Q14457 450 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 EPHA7Q15375 998 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 CKAP2LQ8IYA6 745 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 BANK1Q8NDB2 785 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 TRAPPC12Q8WVT3 735 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 TNPO1Q92973 898 aaKnown RBP13.48□□□□□ -0.25
SSBP3-214ENST00000533209 WNT8AQ9H1J5 351 aa13.48□□□□□ -0.25
SSBP3-214ENST00000533209 POTEMA6NI47 508 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 OATP04181 439 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 P4HBP07237 508 aaKnown RBP13.47□□□□□ -0.25
SSBP3-214ENST00000533209 TECP42680 631 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 PSMC5P62195 406 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 IGBP1P78318 339 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 BFSP2Q13515 415 aa13.47□□□□□ -0.25
SSBP3-214ENST00000533209 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms