RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 HLTFQ14527 1009 aaKnown RBP eCLIP16.21■□□□□ 0.18
CAPN1-224ENST00000533129 ANKRD20A8PQ5CZ79 823 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 CYB5D1Q6P9G0 228 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 SLF2Q8IX21 1173 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 FUKQ8N0W3 1084 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 SGSM3Q96HU1 749 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 EYA3Q99504 573 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 TSG101Q99816 390 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 OSBPL7Q9BZF2 842 aa16.21■□□□□ 0.18
CAPN1-224ENST00000533129 MYMKA6NI61 221 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 BTNL10A8MVZ5 291 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 TECP42680 631 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 NONOQ15233 471 aaKnown RBP eCLIP16.2■□□□□ 0.18
CAPN1-224ENST00000533129 UAP1Q16222 522 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-224ENST00000533129 GRIK5Q16478 980 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 LETM2Q2VYF4 491 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 LACTB2Q53H82 288 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-224ENST00000533129 MFSD14BQ5SR56 506 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 FAM83BQ5T0W9 1011 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 PAXIP1Q6ZW49 1069 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-224ENST00000533129 TAF4BQ92750 862 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 ZMYND12Q9H0C1 365 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 NOL4O94818 638 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 CYP2D6P10635 497 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 MTMR3Q13615 1198 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 SLC35G1Q2M3R5 365 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 KLHL7Q8IXQ5 586 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 CALR3Q96L12 384 aaKnown RBP16.2■□□□□ 0.18
CAPN1-224ENST00000533129 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 CENPHQ9H3R5 247 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 NLRC4Q9NPP4 1024 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
CAPN1-224ENST00000533129 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 CTNNA1P35221 906 aaKnown RBP16.19■□□□□ 0.18
CAPN1-224ENST00000533129 PPP2R2AP63151 447 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 PSMD2Q13200 908 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 SCFD2Q8WU76 684 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 CNKSR1Q969H4 720 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 SEC16BQ96JE7 1060 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 PBKQ96KB5 322 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-224ENST00000533129 IL17RBQ9NRM6 502 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 ODF2LQ9ULJ1 636 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 PACSIN2Q9UNF0 486 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-224ENST00000533129 SUGT1Q9Y2Z0 365 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 RIMBP2O15034 1052 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 CYTH3O43739 400 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 IFFO1Q0D2I5 559 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 GRB10Q13322 594 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 NEK8Q86SG6 692 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 CACNA2D3Q8IZS8 1091 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 TBC1D5Q92609 795 aa16.19■□□□□ 0.18
CAPN1-224ENST00000533129 FAM163AQ96GL9 167 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-224ENST00000533129 DNM1LO00429 736 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 TFAP4Q01664 338 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 RPS6KA1Q15418 735 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 ACTRT1Q8TDG2 376 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 LARP4BQ92615 738 aaKnown RBP16.18■□□□□ 0.18
CAPN1-224ENST00000533129 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
CAPN1-224ENST00000533129 XRCC4Q13426 336 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 QPCTQ16769 361 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 SH3RF3Q8TEJ3 882 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-224ENST00000533129 TATDN2Q93075 761 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 VEZTQ9HBM0 779 aa16.18■□□□□ 0.18
CAPN1-224ENST00000533129 A0A087X0T9 212 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 GPR75-ASB3A0A0A6YYF3 556 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 FAM228BP0C875 321 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 PLCG2P16885 1265 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 RNASE9P60153 205 aaKnown RBP16.17■□□□□ 0.18
CAPN1-224ENST00000533129 GTF2IP78347 998 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 OR2W6PQ8NHA6 318 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 N4BP2L2Q92802 583 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-224ENST00000533129 LSM14BQ9BX40 385 aaKnown RBP16.17■□□□□ 0.18
CAPN1-224ENST00000533129 AIPL1Q9NZN9 384 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 KCNK3O14649 394 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 GAKO14976 1311 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 KIF4AO95239 1232 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 GHRP10912 638 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 SCTRP47872 440 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 USP11P51784 963 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 POLR2FP61218 127 aaKnown RBP16.17■□□□□ 0.18
CAPN1-224ENST00000533129 FKBP3Q00688 224 aaKnown RBP16.17■□□□□ 0.18
CAPN1-224ENST00000533129 BYSLQ13895 437 aaKnown RBP16.17■□□□□ 0.18
CAPN1-224ENST00000533129 ZCWPW2Q504Y3 356 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 C10orf76Q5T2E6 689 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 RAPGEF5Q92565 580 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 PNMA5Q96PV4 448 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 MCM9Q9NXL9 1143 aa16.17■□□□□ 0.18
CAPN1-224ENST00000533129 PALM3A6NDB9 673 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-224ENST00000533129 BTDP43251 543 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 SPRED3Q2MJR0 410 aa16.16■□□□□ 0.18
CAPN1-224ENST00000533129 GKAP1Q5VSY0 366 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-224ENST00000533129 FAM228AQ86W67 206 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms