RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 RNF26Q9BY78 433 aaPredicted RBP20.31■□□□□ 0.84
SMG1-203ENST00000532700 EHMT1Q9H9B1 1298 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 A0A0C4DFX4 3053 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 COL4A6Q14031 1691 aa20.31■□□□□ 0.84
SMG1-203ENST00000532700 SPTBN5Q9NRC6 3674 aaKnown RBP20.3■□□□□ 0.84
SMG1-203ENST00000532700 MBLAC1A4D2B0 266 aaPredicted RBP20.3■□□□□ 0.84
SMG1-203ENST00000532700 MAFGO15525 162 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 INSRRP14616 1297 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 IGFBP4P22692 258 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 IGBP1P78318 339 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 MGAT3Q09327 533 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 PLCB4Q15147 1175 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 NPY5RQ15761 445 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 PLA2G4DQ86XP0 818 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 REXO1Q8N1G1 1221 aaKnown RBP20.3■□□□□ 0.84
SMG1-203ENST00000532700 LENG9Q96B70 501 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 GAS2L1Q99501 681 aaPredicted RBP20.3■□□□□ 0.84
SMG1-203ENST00000532700 TM6SF1Q9BZW5 370 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 ERAP1Q9NZ08 941 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 VCANP13611 3396 aa20.3■□□□□ 0.84
SMG1-203ENST00000532700 NRCAMQ92823 1304 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 ABHD14A-ACY1A0A1B0GW23 586 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.29■□□□□ 0.84
SMG1-203ENST00000532700 EPB41L2O43491 1005 aaKnown RBP20.29■□□□□ 0.84
SMG1-203ENST00000532700 TLL1O43897 1013 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 ATG7O95352 703 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 GJB5O95377 273 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 PARNO95453 639 aaKnown RBP20.29■□□□□ 0.84
SMG1-203ENST00000532700 CYP3A4P08684 503 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 FAM26DQ5JW98 314 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 CCDC60Q8IWA6 550 aaPredicted RBP20.29■□□□□ 0.84
SMG1-203ENST00000532700 GJA10Q969M2 543 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 SMARCAD1Q9H4L7 1026 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 TUBE1Q9UJT0 475 aa20.29■□□□□ 0.84
SMG1-203ENST00000532700 NLRC5Q86WI3 1866 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 ATG2AQ2TAZ0 1938 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 IGKV6D-21A0A0A0MT36 114 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 LPXNO60711 386 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 IKBKEQ14164 716 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 DNAJB3Q8WWF6 145 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 ARNTL2Q8WYA1 636 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 SDF4Q9BRK5 362 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
SMG1-203ENST00000532700 SEC24BO95487 1268 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 ATP4AP20648 1035 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 ZNF76P36508 570 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 LPIN1Q14693 890 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 ABHD15Q6UXT9 468 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 NIPA1Q7RTP0 329 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 TEX2Q8IWB9 1127 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 GJB4Q9NTQ9 266 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 PDRG1Q9NUG6 133 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 TPCN1Q9ULQ1 816 aa20.27■□□□□ 0.84
SMG1-203ENST00000532700 LINC01553A4QN01 128 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 ZBTB42B2RXF5 422 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 GHRP10912 638 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 GNAT1P11488 350 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 TMEM62Q0P6H9 643 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 SCRN1Q12765 414 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 MICALL1Q8N3F8 863 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 ZNF274Q96GC6 653 aaPredicted RBP20.26■□□□□ 0.83
SMG1-203ENST00000532700 FAM49AQ9H0Q0 323 aaPredicted RBP20.26■□□□□ 0.83
SMG1-203ENST00000532700 GLT8D2Q9H1C3 349 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
SMG1-203ENST00000532700 PRRC2BQ5JSZ5 2229 aaKnown RBP20.26■□□□□ 0.83
SMG1-203ENST00000532700 MYH9P35579 1960 aaKnown RBP20.25■□□□□ 0.83
SMG1-203ENST00000532700 M0R2N6 131 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 IPO5O00410 1097 aaKnown RBP20.25■□□□□ 0.83
SMG1-203ENST00000532700 CAND2O75155 1236 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 LARGE1O95461 756 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 STAT5BP51692 787 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 GRB10Q13322 594 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 PRR16Q569H4 304 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 MYOCDQ8IZQ8 938 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 GDPD5Q8WTR4 605 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 LINC01599Q8WXQ3 324 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 ZBED2Q9BTP6 218 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 AGO3Q9H9G7 860 aaKnown RBP20.25■□□□□ 0.83
SMG1-203ENST00000532700 TRPC6Q9Y210 931 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 MTCH2Q9Y6C9 303 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 CDY2AQ9Y6F7 541 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 EVPLQ92817 2033 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
SMG1-203ENST00000532700 CTDNEP1O95476 244 aa20.24■□□□□ 0.83
SMG1-203ENST00000532700 CIITAP33076 1130 aa20.24■□□□□ 0.83
SMG1-203ENST00000532700 AKAP17AQ02040 695 aaKnown RBP20.24■□□□□ 0.83
SMG1-203ENST00000532700 PLPPR4Q7Z2D5 763 aa20.24■□□□□ 0.83
SMG1-203ENST00000532700 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
SMG1-203ENST00000532700 CCDC12Q8WUD4 166 aaPredicted RBP20.24■□□□□ 0.83
SMG1-203ENST00000532700 ZNF577Q9BSK1 485 aa20.24■□□□□ 0.83
SMG1-203ENST00000532700 IFIH1Q9BYX4 1025 aaKnown RBP20.24■□□□□ 0.83
SMG1-203ENST00000532700 POTEB3A0JP26 581 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 KIF28PB7ZC32 967 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 GNA11P29992 359 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 HTRA4P83105 476 aaPredicted RBP20.23■□□□□ 0.83
SMG1-203ENST00000532700 SSRP1Q08945 709 aaKnown RBP20.23■□□□□ 0.83
SMG1-203ENST00000532700 FBXO47Q5MNV8 452 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 TAF2Q6P1X5 1199 aa20.23■□□□□ 0.83
SMG1-203ENST00000532700 POTEBQ6S5H4 581 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms