RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 TRIM11Q96F44 468 aa16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
PCDHA3-202ENST00000532566 PRELPP51888 382 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 GTF2A1P52655 376 aaPredicted RBP16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 ADSSL1Q8N142 457 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 RUNDC3BQ96NL0 473 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 DAPK3O43293 454 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 STK10O94804 968 aaKnown RBP16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 ABCD1P33897 745 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 PTPAQ15257 358 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 MIS18BP1Q6P0N0 1132 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 HSPA6P17066 643 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 MTF1Q14872 753 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 KCTD2Q14681 263 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 KNOP1Q1ED39 458 aaKnown RBP16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 NAALADL2Q58DX5 795 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 RBM43Q6ZSC3 357 aaKnown RBP16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 C16orf86Q6ZW13 317 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 PCDHB4Q9Y5E5 795 aa16.63■□□□□ 0.25
PCDHA3-202ENST00000532566 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 UHMK1Q8TAS1 419 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 RSAD2Q8WXG1 361 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 JPH2Q9BR39 696 aaPredicted RBP16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 FUCA2Q9BTY2 467 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 MAPK4P31152 587 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 GRIN1Q05586 938 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 ANKRD40Q6AI12 368 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 ELOA2Q8IYF1 753 aaPredicted RBP16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 AK9Q5TCS8 1911 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 EIF3CLB5ME19 914 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 STAM2O75886 525 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 ATF2P15336 505 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 STX2P32856 288 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 YARSP54577 528 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 LGSNQ5TDP6 509 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 TTBK2Q6IQ55 1244 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 ANKRD42Q8N9B4 389 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 P3H4Q92791 437 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 EIF3CQ99613 913 aaKnown RBP16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 CAPN11Q9UMQ6 739 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 TMOD1P28289 359 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 PEX3P56589 373 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 DMTNQ08495 405 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 MTERF2Q49AM1 385 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 VSIG1Q86XK7 387 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 BBOF1Q8ND07 529 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 MIS12Q9H081 205 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 ZNF148Q9UQR1 794 aa16.62■□□□□ 0.25
PCDHA3-202ENST00000532566 STXBP3O00186 592 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 THAP12O43422 761 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 CC2D1AQ6P1N0 951 aaPredicted RBP16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 RNF34Q969K3 372 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 WDR24Q96S15 920 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 HERC5Q9UII4 1024 aaKnown RBP16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 NOD1Q9Y239 953 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 RNF8O76064 485 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 PSAPP07602 524 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 MAN1A1P33908 653 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 NR1I3Q14994 352 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 SEPT14Q6ZU15 432 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 FEM1BQ9UK73 627 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 TFDP1Q14186 410 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 EMBQ6PCB8 327 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 CACNA2D3Q8IZS8 1091 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 EDEM3Q9BZQ6 932 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 STIM2Q9P246 746 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 DNAJC12Q9UKB3 198 aa16.61■□□□□ 0.25
PCDHA3-202ENST00000532566 HGSO14964 777 aaPredicted RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 SRGAP2O75044 1071 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 STAT3P40763 770 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 IRX5P78411 483 aaPredicted RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 DYDC2Q96IM9 177 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 FER1L4A9Z1Z3 1794 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 MTMR1Q13613 665 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 DPY19L2Q6NUT2 758 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 FBXL16Q8N461 479 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 RNF10Q8N5U6 811 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 GPATCH11Q8N954 259 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 MMS19Q96T76 1030 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 MRFAP1Q9Y605 127 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 INO80B-WBP1J3KQ70 363 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 ITIH3Q06033 890 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 SF3A3Q12874 501 aaKnown RBP eCLIP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 DALRD3Q5D0E6 543 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 PDXDC2PQ6P474 469 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 PADI6Q6TGC4 694 aa16.6■□□□□ 0.25
PCDHA3-202ENST00000532566 RMDN3Q96TC7 470 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms