RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 VGLL2Q8N8G2 317 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MAGEC3Q8TD91 643 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 OPTNQ96CV9 577 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 HIC2Q96JB3 615 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 PYM1Q9BRP8 204 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF70Q9UC06 446 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 MTRF1LQ9UGC7 380 aaKnown RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 CTNND2Q9UQB3 1225 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF711Q9Y462 761 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 V9GY48 417 aaPredicted RBP7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 TNKSO95271 1327 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 DOT1LQ8TEK3 1739 aa7.39□□□□□ -1.23
TGFBR3-209ENST00000532540 WNT10BO00744 389 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 SEMA3EO15041 775 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 KRT14P02533 472 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ERCC5P28715 1186 aaPredicted RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF76P36508 570 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 PPP2R2AP63151 447 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 HTRA3P83110 453 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 DEUP1Q05D60 604 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 SHROOM1Q2M3G4 852 aaPredicted RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 SLC44A4Q53GD3 710 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 HSP90AA5PQ58FG0 334 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CWF19L1Q69YN2 538 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ZC3H18Q86VM9 953 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ARL8AQ96BM9 186 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CHMP6Q96FZ7 201 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 NAF1Q96HR8 494 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 NUP58Q9BVL2 599 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 MMADHCQ9H3L0 296 aaPredicted RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 SAMSN1Q9NSI8 373 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 GJB4Q9NTQ9 266 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 POLR3EQ9NVU0 708 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ZSWIM5Q9P217 1185 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 HDAC6Q9UBN7 1215 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 MROH7-TTC4A0A0A0MT08 1334 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ATXN2Q99700 1313 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ANO9A1A5B4 782 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CCT8L1PA6NM43 557 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 TMCC1O94876 653 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 PYGLP06737 847 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CDK8P49336 464 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 SSRP1Q08945 709 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 WLSQ5T9L3 541 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 VPS52Q8N1B4 723 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 DRAXINQ8NBI3 349 aaPredicted RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 SLC10A4Q96EP9 437 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 DDX23Q9BUQ8 820 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF341Q9BYN7 854 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 STOML1Q9UBI4 398 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 RASAL2Q9UJF2 1139 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 L3MBTL1Q9Y468 752 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 DDTLA6NHG4 134 aaPredicted RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 H0Y3Z8 333 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 BACH1O14867 736 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 FGFR1OPO95684 399 aaKnown RBP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ATP5DP30049 168 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CDC25CP30307 473 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ZNF131P52739 623 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 TMEM132AQ24JP5 1023 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 Q4G0T1 1027 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 DACT2Q5SW24 774 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CCDC80Q76M96 950 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 VPS36Q86VN1 386 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 MAP7D3Q8IWC1 876 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 ARL10Q8N8L6 244 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 RUBCNQ92622 972 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 MAP4K1Q92918 833 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 GORASP1Q9BQQ3 440 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 MMRN2Q9H8L6 949 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 TXLNGQ9NUQ3 528 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 PPP1R9AQ9ULJ8 1098 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 DAAM1Q9Y4D1 1078 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 COL18A1P39060 1754 aa7.38□□□□□ -1.23
TGFBR3-209ENST00000532540 CCDC169A6NNP5 214 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 SERPINB4P48594 390 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 UBXN2AP68543 259 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 SKOR1P84550 965 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD20A8PQ5CZ79 823 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 DENND2CQ68D51 928 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 LCA5Q86VQ0 697 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 ARHGAP24Q8N264 748 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 CEP63Q96MT8 703 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 NAP1L3Q99457 506 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 DDX4Q9NQI0 724 aaKnown RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 UTP11Q9Y3A2 253 aaKnown RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 B4DLN1 442 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 AKR1B1P15121 316 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 VEGFAP15692 232 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 ATP4AP20648 1035 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 GCLCP48506 637 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 HUNKP57058 714 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 C11orf91Q3C1V1 193 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 CRELD2Q6UXH1 353 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 ST13P4Q8IZP2 240 aaPredicted RBP7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 MGARPQ8TDB4 240 aa7.37□□□□□ -1.23
TGFBR3-209ENST00000532540 ANKRD27Q96NW4 1050 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms