RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
PTPRK-221ENST00000532331 ERCC6LQ2NKX8 1250 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 CEP57Q86XR8 500 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 BHMT2Q9H2M3 363 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 GINM1Q9NU53 330 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 GABBR1Q9UBS5 961 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 NOC2LQ9Y3T9 749 aaKnown RBP12.28□□□□□ -0.44
PTPRK-221ENST00000532331 RFX7Q2KHR2 1363 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 VPS52Q8N1B4 723 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 C2orf40Q9H1Z8 148 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 THAP12O43422 761 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 ALDH1A1P00352 501 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 NEK9Q8TD19 979 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 VCPKMTQ9H867 229 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 FAM170AA1A519 330 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 A6NJR5 290 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 CLIC2O15247 247 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 RYBPQ8N488 228 aaPredicted RBP12.28□□□□□ -0.44
PTPRK-221ENST00000532331 RNF139Q8WU17 664 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 PPP2R3BQ9Y5P8 575 aa12.28□□□□□ -0.44
PTPRK-221ENST00000532331 MED7O43513 233 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 MEGF6O75095 1541 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.44
PTPRK-221ENST00000532331 LRRC41Q15345 812 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 ITSN1Q15811 1721 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 CYB5R4Q7L1T6 521 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 SIX6OS1Q8N1H7 587 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 NME8Q8N427 588 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 RIC8AQ9NPQ8 531 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 FANCLQ9NW38 375 aa12.27□□□□□ -0.44
PTPRK-221ENST00000532331 GH1P01241 217 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 DDIT3P35638 169 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 RGS2P41220 211 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 ERO1BQ86YB8 467 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 C17orf53Q8N3J3 647 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-221ENST00000532331 GSDMAQ96QA5 445 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 PFASO15067 1338 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 NECTIN1Q15223 517 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 HHATQ5VTY9 493 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 RNF180Q86T96 592 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 RSAD2Q8WXG1 361 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 HAUS1Q96CS2 278 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 MTMR4Q9NYA4 1195 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 SLC9A2Q9UBY0 812 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 ELF2Q15723 593 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 SLC10A5Q5PT55 438 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 MAP1SQ66K74 1059 aaPredicted RBP12.27□□□□□ -0.45
PTPRK-221ENST00000532331 B4GALNT4Q76KP1 1039 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 PIGOQ8TEQ8 1089 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 POLLQ9UGP5 575 aa12.27□□□□□ -0.45
PTPRK-221ENST00000532331 CLDN3O15551 220 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 CIB2O75838 187 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 MYL1P05976 194 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 CXCL9Q07325 125 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 PPP2R5EQ16537 467 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 POLR3EQ9NVU0 708 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 CPSF3Q9UKF6 684 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 NDUFB10O96000 172 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 P4HBP07237 508 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 RCAN1P53805 252 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 BAATQ14032 418 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 WHAMMP3Q1A5X7 153 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 COL5A2P05997 1499 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 QARSP47897 775 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 ZNF568Q3ZCX4 644 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 SLIT1O75093 1534 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 IPO5O00410 1097 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 PLCG1P19174 1290 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 TPD52P55327 224 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 TSPY1Q01534 308 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 ARL6IP4Q66PJ3 421 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 POLRMTO00411 1230 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 KRT15P19012 456 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 SARNPP82979 210 aaKnown RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 BSPRYQ5W0U4 402 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 GRK7Q8WTQ7 553 aa12.26□□□□□ -0.45
PTPRK-221ENST00000532331 ZKSCAN4Q969J2 545 aaPredicted RBP12.26□□□□□ -0.45
PTPRK-221ENST00000532331 WDR19Q8NEZ3 1342 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 TBC1D8O95759 1140 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 PSMC5P62195 406 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 PADI6Q6TGC4 694 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 C4orf50Q6ZRC1 276 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 GPC2Q8N158 579 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 CHST13Q8NET6 341 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 BEST2Q8NFU1 509 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 OR6B3Q8NGW1 331 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 MRFAP1L1Q96HT8 127 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 DHTKD1Q96HY7 919 aaPredicted RBP12.25□□□□□ -0.45
PTPRK-221ENST00000532331 SEPT10Q9P0V9 454 aa12.25□□□□□ -0.45
PTPRK-221ENST00000532331 KCNK3O14649 394 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms