RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 USP2O75604 605 aaPredicted RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 SBF1O95248 1867 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 COL11A1P12107 1806 aaPredicted RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 FKBP3Q00688 224 aaKnown RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 APBA1Q02410 837 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 SNRNP48Q6IEG0 339 aaKnown RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 B3GNT9Q6UX72 402 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 CCDC51Q96ER9 411 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 RMDN3Q96TC7 470 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TTYH3Q9C0H2 523 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 RNF146Q9NTX7 359 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 CAPN11Q9UMQ6 739 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 RLFQ13129 1914 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TMEM150BA6NC51 233 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 SORBS3O60504 671 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 GCNT3O95395 438 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 NCBP1Q09161 790 aaKnown RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 PLS1Q14651 629 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TMEM132BQ14DG7 1078 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 PGM5Q15124 567 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 WDR59Q6PJI9 974 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 RNF207Q6ZRF8 634 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.81■□□□□ 0.28
SRPRA-206ENST00000532259 MCF2L2Q86YR7 1114 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TMTC1Q8IUR5 882 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 REPS2Q8NFH8 660 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 LXNQ9BS40 222 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TEKT3Q9BXF9 490 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 TRIM10Q9UDY6 481 aa16.81■□□□□ 0.28
SRPRA-206ENST00000532259 ADAM9Q13443 819 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 AS3MTQ9HBK9 375 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 GINM1Q9NU53 330 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 PARP14Q460N5 1801 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 TESPA1A2RU30 521 aaPredicted RBP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 NMT1P30419 496 aaKnown RBP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 SETQ01105 290 aaPredicted RBP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 VGLL4Q14135 290 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 ZC2HC1CQ53FD0 456 aaPredicted RBP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 C1orf186Q6ZWK4 172 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 MOB2Q70IA6 237 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 MYCT1Q8N699 235 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.8■□□□□ 0.28
SRPRA-206ENST00000532259 TELO2Q9Y4R8 837 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 UBIAD1Q9Y5Z9 338 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 PHIPQ8WWQ0 1821 aa16.8■□□□□ 0.28
SRPRA-206ENST00000532259 CLIC2O15247 247 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 FGFR1OPO95684 399 aaKnown RBP16.79■□□□□ 0.28
SRPRA-206ENST00000532259 PLEKP08567 350 aaPredicted RBP16.79■□□□□ 0.28
SRPRA-206ENST00000532259 FECHP22830 423 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 NR2F2P24468 414 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 CASQ1P31415 396 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 MTMR1Q13613 665 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 PDCD2LQ9BRP1 358 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
SRPRA-206ENST00000532259 TUFT1Q9NNX1 390 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 AFG3L2Q9Y4W6 797 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 SLC26A4O43511 780 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 DNAJC7Q99615 494 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 PXMP2Q9NR77 195 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 SIK3Q9Y2K2 1263 aa16.79■□□□□ 0.28
SRPRA-206ENST00000532259 FAM13AO94988 1023 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 DSG3P32926 999 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 TREML2Q5T2D2 321 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 MIER3Q7Z3K6 550 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 ERGIC2Q96RQ1 377 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 SNCAIPQ9Y6H5 919 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 EPN1Q9Y6I3 576 aaPredicted RBP16.78■□□□□ 0.28
SRPRA-206ENST00000532259 DICER1Q9UPY3 1922 aaKnown RBP16.78■□□□□ 0.28
SRPRA-206ENST00000532259 PHLPP2Q6ZVD8 1323 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 TULP1O00294 542 aaPredicted RBP16.78■□□□□ 0.28
SRPRA-206ENST00000532259 NDUFA10O95299 355 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 SLU7O95391 586 aaKnown RBP16.78■□□□□ 0.28
SRPRA-206ENST00000532259 GHRHRQ02643 423 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 COG2Q14746 738 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 EPHA7Q15375 998 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 ZNF569Q5MCW4 686 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 CATSPERGQ6ZRH7 1159 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 EPM2AIP1Q7L775 607 aaPredicted RBP16.78■□□□□ 0.28
SRPRA-206ENST00000532259 NLRC4Q9NPP4 1024 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 JADE2Q9NQC1 790 aa16.78■□□□□ 0.28
SRPRA-206ENST00000532259 REXO2Q9Y3B8 237 aaKnown RBP16.78■□□□□ 0.28
SRPRA-206ENST00000532259 CYP27A1Q02318 531 aa16.77■□□□□ 0.28
SRPRA-206ENST00000532259 SP4Q02446 784 aa16.77■□□□□ 0.28
SRPRA-206ENST00000532259 ELF2Q15723 593 aa16.77■□□□□ 0.28
SRPRA-206ENST00000532259 UGCGQ16739 394 aa16.77■□□□□ 0.28
SRPRA-206ENST00000532259 KNOP1Q1ED39 458 aaKnown RBP16.77■□□□□ 0.28
SRPRA-206ENST00000532259 RIT2Q99578 217 aa16.77■□□□□ 0.28
SRPRA-206ENST00000532259 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.27
SRPRA-206ENST00000532259 SPDYE16A6NNV3 312 aaPredicted RBP16.77■□□□□ 0.27
SRPRA-206ENST00000532259 KCNMA1Q12791 1236 aa16.77■□□□□ 0.27
SRPRA-206ENST00000532259 RRAGAQ7L523 313 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms