RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 PIBF1Q8WXW3 757 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 MTMR8Q96EF0 704 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 RRP36Q96EU6 259 aaKnown RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 FGD4Q96M96 766 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 PIGSQ96S52 555 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 MAF1Q9H063 256 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 RIOX1Q9H6W3 641 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 GABBR1Q9UBS5 961 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ADD3Q9UEY8 706 aaKnown RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 SEC63Q9UGP8 760 aaKnown RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZHX1Q9UKY1 873 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 OGDHLQ9ULD0 1010 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 NAP1L2Q9ULW6 460 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 MRPL11Q9Y3B7 192 aaKnown RBP6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 PCDHA1Q9Y5I3 950 aa6.66□□□□□ -1.34
HMGB1P42-201ENST00000532126 HTTP42858 3142 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 KLF18A0A0U1RQI7 1052 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 B4DLN1 442 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 CYTH3O43739 400 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 PPP1R11O60927 126 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 PLEKHA8P1O95397 391 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 ADH1BP00325 375 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 ZNF865P0CJ78 1059 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 RARBP10826 455 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 AKR1A1P14550 325 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 MRPL12P52815 198 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 RPS6P62753 249 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 BIRC2Q13490 618 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 ACVR2BQ13705 512 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 SLC35G1Q2M3R5 365 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 ANO1Q5XXA6 986 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 Q6ZUG5 572 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 RUFY3Q7L099 469 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 ARMCX2Q7L311 632 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 NECAB2Q7Z6G3 386 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 SH3RF1Q7Z6J0 888 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 CMTR1Q8N1G2 835 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 SRBD1Q8N5C6 995 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 RASGRP4Q8TDF6 673 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 SCG3Q8WXD2 468 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 BRF1Q92994 677 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 RELTQ969Z4 430 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 MPHOSPH6Q99547 160 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 SPZ1Q9BXG8 430 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 TM6SF1Q9BZW5 370 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 ABHD16BQ9H3Z7 469 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 NEUROD4Q9HD90 331 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 RBM28Q9NW13 759 aaKnown RBP6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 FAM184BQ9ULE4 1060 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 CYP46A1Q9Y6A2 500 aa6.65□□□□□ -1.34
HMGB1P42-201ENST00000532126 COL11A1P12107 1806 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 CCDC196A0A1B0GTZ2 297 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 GOLGA8AA7E2F4 631 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 GOLGA8BA8MQT2 603 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 CFBP00751 764 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 MZF1P28698 734 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 METAP2P50579 478 aaKnown RBP eCLIP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 ALDH5A1P51649 535 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 RCAN1P53805 252 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 APOBRQ0VD83 1088 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 PPP2R5BQ15173 497 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 RTN1Q16799 776 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 TMTC3Q6ZXV5 915 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 EEPD1Q7L9B9 569 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 UBE2Q1Q7Z7E8 422 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 GJD3Q8N144 294 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 FBXL16Q8N461 479 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 ARRDC4Q8NCT1 418 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 DNERQ8NFT8 737 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 SYTL5Q8TDW5 730 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 DIS3LQ8TF46 1054 aaKnown RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 TBC1D5Q92609 795 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 PAWRQ96IZ0 340 aaKnown RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 HTATIP2Q9BUP3 242 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 UPF3BQ9BZI7 483 aaKnown RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 C11orf49Q9H6J7 331 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 XPNPEP3Q9NQH7 507 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 ZNF358Q9NW07 568 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 MAP3K20Q9NYL2 800 aaKnown RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 TCEAL9Q9UHQ7 104 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 STRIP2Q9ULQ0 834 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 R3HCC1Q9Y3T6 440 aaKnown RBP6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 PCDHB11Q9Y5F2 797 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 ASTN1O14525 1302 aa6.64□□□□□ -1.35
HMGB1P42-201ENST00000532126 hCG_1642624A0A1W2PR95 340 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 KBTBD13C9JR72 458 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 GCOM1H8Y6P7 765 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 DNM1LO00429 736 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 OPLAHO14841 1288 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 TLL1O43897 1013 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 PGK1P00558 417 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 POLR2MP0CAP2 368 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 PCSK2P16519 638 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 HOXA13P31271 388 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 HSD17B4P51659 736 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 TNFAIP2Q03169 654 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 LINC01559Q495D7 138 aa6.63□□□□□ -1.35
HMGB1P42-201ENST00000532126 GJC2Q5T442 439 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms