RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PPP2R5CQ13362 524 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 STK38Q15208 465 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 CSPP1Q1MSJ5 1256 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 SLC9C1Q4G0N8 1177 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 CELF3Q5SZQ8 465 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 ZNF746Q6NUN9 644 aaPredicted RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 B3GNT9Q6UX72 402 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 TRPV1Q8NER1 839 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 RDM1Q8NG50 284 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 ARMC5Q96C12 935 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 TEKT3Q9BXF9 490 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 RAB34Q9BZG1 259 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 PDGFCQ9NRA1 345 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 TCEAL9Q9UHQ7 104 aa14.11□□□□□ -0.15
COPB1-208ENST00000532088 TSR3Q9UJK0 312 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 GNEQ9Y223 722 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 SRPRBQ9Y5M8 271 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 DDX49Q9Y6V7 483 aaKnown RBP14.11□□□□□ -0.15
COPB1-208ENST00000532088 SPTLC2O15270 562 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 MARCH6O60337 910 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 GAS7O60861 476 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 ATP9AO75110 1047 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 RNF40O75150 1001 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 DUSP11O75319 330 aaKnown RBP14.1□□□□□ -0.15
COPB1-208ENST00000532088 FARP2O94887 1054 aaPredicted RBP14.1□□□□□ -0.15
COPB1-208ENST00000532088 ARIH2O95376 493 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 GH1P01241 217 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 SFNP31947 248 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 SP2Q02086 613 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 ITGB3BPQ13352 177 aaPredicted RBP14.1□□□□□ -0.15
COPB1-208ENST00000532088 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 PDIA5Q14554 519 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 TMEM266Q2M3C6 531 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 PRAMEF19Q5SWL8 479 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 DTHD1Q6ZMT9 781 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 SMAP1Q8IYB5 467 aaPredicted RBP14.1□□□□□ -0.15
COPB1-208ENST00000532088 RDH13Q8NBN7 331 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 AK8Q96MA6 479 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 HMX1Q9NP08 348 aaPredicted RBP14.1□□□□□ -0.15
COPB1-208ENST00000532088 PCDHA12Q9UN75 941 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 ELP1O95163 1332 aa14.1□□□□□ -0.15
COPB1-208ENST00000532088 SLC26A4O43511 780 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 GGPS1O95749 300 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 RARBP10826 455 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 SMPD1P17405 629 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 LONP1P36776 959 aaKnown RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 JAK3P52333 1124 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 TRIM32Q13049 653 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 LY6KQ17RY6 165 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 DHX37Q8IY37 1157 aaKnown RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 IGSF22Q8N9C0 903 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 PPTC7Q8NI37 304 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 LEO1Q8WVC0 666 aaPredicted RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 SPATA32Q96LK8 384 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 FTOQ9C0B1 505 aaKnown RBP eCLIP14.09□□□□□ -0.15
COPB1-208ENST00000532088 UPF3AQ9H1J1 476 aaKnown RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 TTC12Q9H892 705 aaPredicted RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 JPH1Q9HDC5 661 aaPredicted RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 TFIP11Q9UBB9 837 aaKnown RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 SLC9A2Q9UBY0 812 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
COPB1-208ENST00000532088 VAV3Q9UKW4 847 aa14.09□□□□□ -0.15
COPB1-208ENST00000532088 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.08□□□□□ -0.16
COPB1-208ENST00000532088 ATG7O95352 703 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 HOXD8P13378 290 aaPredicted RBP14.08□□□□□ -0.16
COPB1-208ENST00000532088 CCND3P30281 292 aaPredicted RBP14.08□□□□□ -0.16
COPB1-208ENST00000532088 TXKP42681 527 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 GJA9P57773 515 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 ARHGAP1Q07960 439 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 SPIRE1Q08AE8 756 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 TMEM87AQ8NBN3 555 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 NEK9Q8TD19 979 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 GBP4Q96PP9 640 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.08□□□□□ -0.16
COPB1-208ENST00000532088 MLXIPQ9HAP2 919 aa14.08□□□□□ -0.16
COPB1-208ENST00000532088 PAK6Q9NQU5 681 aaPredicted RBP14.08□□□□□ -0.16
COPB1-208ENST00000532088 FBXO2Q9UK22 296 aaPredicted RBP14.08□□□□□ -0.16
COPB1-208ENST00000532088 WDR64B1ANS9 1081 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 CUTAO60888 179 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 NCLP19338 710 aaKnown RBP14.07□□□□□ -0.16
COPB1-208ENST00000532088 MUTP22033 750 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 CST5P28325 142 aaPredicted RBP14.07□□□□□ -0.16
COPB1-208ENST00000532088 GCGRP47871 477 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
COPB1-208ENST00000532088 FOXD4L6Q3SYB3 417 aaPredicted RBP14.07□□□□□ -0.16
COPB1-208ENST00000532088 BRDTQ58F21 947 aaPredicted RBP14.07□□□□□ -0.16
COPB1-208ENST00000532088 FOXD4L3Q6VB84 417 aaPredicted RBP14.07□□□□□ -0.16
COPB1-208ENST00000532088 CYFIP1Q7L576 1253 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 TLK2Q86UE8 772 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 KCTD17Q8N5Z5 321 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 SH3TC2Q8TF17 1288 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 AP5M1Q9H0R1 490 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 SPC25Q9HBM1 224 aa14.07□□□□□ -0.16
COPB1-208ENST00000532088 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
COPB1-208ENST00000532088 A6NJR5 290 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms