RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	CSF2RA	P15509	400 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	GJB2	P29033	226 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	FAM160B1	Q5W0V3	765 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	LMBR1	Q8WVP7	490 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	ATP6V0A1	Q93050	837 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	KCNMB3	Q9NPA1	279 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	PCDHA10	Q9Y5I2	948 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	NRCAM	Q92823	1304 aa		29.17	■■■□□ 2.26
PICALM-215	ENST00000531558	PSAP	P07602	524 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	SLC26A2	P50443	739 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	RBL2	Q08999	1139 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	PPFIA1	Q13136	1202 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	CUL4A	Q13619	759 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	SERINC5	Q86VE9	423 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	UNC45A	Q9H3U1	944 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	ZNF302	Q9NR11	478 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	SMC3	Q9UQE7	1217 aa		29.16	■■■□□ 2.26
PICALM-215	ENST00000531558	LAMA3	Q16787	3333 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	TREH	O43280	583 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	CHMP2A	O43633	222 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	PLCB4	Q15147	1175 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	POTED	Q86YR6	584 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	RETREG2	Q8NC44	543 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	WNT8B	Q93098	351 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	FAM20A	Q96MK3	541 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	SAMM50	Q9Y512	469 aa		29.15	■■■□□ 2.26
PICALM-215	ENST00000531558	TBX3	O15119	743 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	SFN	P31947	248 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	JAK3	P52333	1124 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	ADAM17	P78536	824 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	GRIK4	Q16099	956 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	TRIM71	Q2Q1W2	868 aa	Known RBP	29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	SWSAP1	Q6NVH7	229 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	PDXDC2P	Q6P474	469 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	B3GNT9	Q6UX72	402 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	SCLY	Q96I15	445 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	DISC1	Q9NRI5	854 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	TRPC6	Q9Y210	931 aa		29.14	■■■□□ 2.26
PICALM-215	ENST00000531558	WNT7A	O00755	349 aa		29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	GNL2	Q13823	731 aa	Known RBP	29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	C9orf50	Q5SZB4	431 aa		29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	NOSTRIN	Q8IVI9	506 aa		29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	TNPO1	Q92973	898 aa	Known RBP	29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	IL23A	Q9NPF7	189 aa		29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	MAFB	Q9Y5Q3	323 aa	Predicted RBP	29.13	■■■□□ 2.25
PICALM-215	ENST00000531558	KIF28P	B7ZC32	967 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	CKB	P12277	381 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	INSRR	P14616	1297 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	SHH	Q15465	462 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	RDM1	Q8NG50	284 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	HAS1	Q92839	578 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	VAV3	Q9UKW4	847 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	IGSF9B	Q9UPX0	1349 aa		29.12	■■■□□ 2.25
PICALM-215	ENST00000531558	POTEB3	A0JP26	581 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	IQCF3	P0C7M6	154 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	SELP	P16109	830 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	POTEB	Q6S5H4	581 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	C16orf59	Q7L2K0	433 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	ATP8B4	Q8TF62	1192 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	GABBR1	Q9UBS5	961 aa		29.11	■■■□□ 2.25
PICALM-215	ENST00000531558	TANC1	Q9C0D5	1861 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	RRN3P2	A6NIE6	340 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	ACR	P10323	421 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	U2AF2	P26368	475 aa	Known RBP eCLIP	29.1	■■■□□ 2.25	3e-7	■■■■□ 22.3
PICALM-215	ENST00000531558	RFC2	P35250	354 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	PSRC1	Q6PGN9	363 aa	Predicted RBP	29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	LRRC8D	Q7L1W4	858 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	MIER3	Q7Z3K6	550 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	TUBE1	Q9UJT0	475 aa		29.1	■■■□□ 2.25
PICALM-215	ENST00000531558	MBLAC1	A4D2B0	266 aa	Predicted RBP	29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	MARCH6	O60337	910 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	NEMF	O60524	1076 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	ATP4A	P20648	1035 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	IGBP1	P78318	339 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	PPP2R5C	Q13362	524 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	MARCH8	Q5T0T0	291 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	SLFN12	Q8IYM2	578 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	VWCE	Q96DN2	955 aa		29.09	■■■□□ 2.25
PICALM-215	ENST00000531558	TRIP12	Q14669	1992 aa	Predicted RBP	29.09	■■■□□ 2.25
PICALM-215	ENST00000531558		K7ELQ4	463 aa	Predicted RBP	29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	HBP1	O60381	514 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	BAG4	O95429	457 aa	Known RBP	29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	ATP2B1	P20020	1258 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	THPO	P40225	353 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	CALCRL	Q16602	461 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	TMEM240	Q5SV17	173 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	TRAF7	Q6Q0C0	670 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	CKAP2L	Q8IYA6	745 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	RPUSD2	Q8IZ73	545 aa	Known RBP	29.08	■■■□□ 2.25
PICALM-215	ENST00000531558	SNX21	Q969T3	373 aa		29.08	■■■□□ 2.25
PICALM-215	ENST00000531558		H3BQV1	296 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	CAND2	O75155	1236 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	PFKM	P08237	780 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	TRAPPC10	P48553	1259 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	UGCG	Q16739	394 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	LRIT3	Q3SXY7	679 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	ZNF618	Q5T7W0	954 aa		29.07	■■■□□ 2.24
PICALM-215	ENST00000531558	TAF2	Q6P1X5	1199 aa		29.07	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms