RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SLC12A7Q9Y666 1083 aa21.13■□□□□ 0.97
SSSCA1-206ENST00000531405 MYH9P35579 1960 aaKnown RBP21.13■□□□□ 0.97
SSSCA1-206ENST00000531405 ADGRA3Q8IWK6 1321 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 PLXNA4Q9HCM2 1894 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 MBLAC1A4D2B0 266 aaPredicted RBP21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 GRXCR2A6NFK2 248 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 PI4K2BG5E9Z4 385 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 LINC00271P0C7V0 271 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 SSTR3P32745 418 aaPredicted RBP21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 FBXO47Q5MNV8 452 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 CREB3L3Q68CJ9 461 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 RSPH3Q86UC2 560 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 MICU3Q86XE3 530 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 FANCBQ8NB91 859 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 PCYT2Q99447 389 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 ESYT1Q9BSJ8 1104 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 SMARCAD1Q9H4L7 1026 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 NSUN3Q9H649 340 aaKnown RBP21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 JADE2Q9NQC1 790 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 CDY2AQ9Y6F7 541 aa21.12■□□□□ 0.97
SSSCA1-206ENST00000531405 ENPP3O14638 875 aa21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 GPR37L1O60883 481 aa21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 PABPC5Q96DU9 382 aaKnown RBP21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 FAM49AQ9H0Q0 323 aaPredicted RBP21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 RC3H2Q9HBD1 1191 aaKnown RBP21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 HCN4Q9Y3Q4 1203 aa21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 WDFY4Q6ZS81 3184 aa21.11■□□□□ 0.97
SSSCA1-206ENST00000531405 FNDC1Q4ZHG4 1894 aaPredicted RBP21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 GRM6O15303 877 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 CSPG5O95196 566 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 MRPS6P82932 125 aaKnown RBP21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 NECTIN1Q15223 517 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 CYP2W1Q8TAV3 490 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 LINC01599Q8WXQ3 324 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 PGBD1Q96JS3 809 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 AGO3Q9H9G7 860 aaKnown RBP21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 JPH1Q9HDC5 661 aaPredicted RBP21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 CLDND1Q9NY35 253 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 MUC6Q6W4X9 2439 aa21.1■□□□□ 0.97
SSSCA1-206ENST00000531405 CNTNAP5Q8WYK1 1306 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 C5orf67F2Z3F1 127 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 INSRRP14616 1297 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 CD52P31358 61 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 BMPR1AP36894 532 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 TMEM62Q0P6H9 643 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 WWC2Q6AWC2 1192 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 TYW1BQ6NUM6 668 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 TSHZ1Q6ZSZ6 1077 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 TRAPPC12Q8WVT3 735 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 ANO2Q9NQ90 1003 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 KCNH7Q9NS40 1196 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 SLC9A2Q9UBY0 812 aa21.09■□□□□ 0.97
SSSCA1-206ENST00000531405 BTG3Q14201 252 aaPredicted RBP21.08■□□□□ 0.97
SSSCA1-206ENST00000531405 COL19A1Q14993 1142 aa21.08■□□□□ 0.97
SSSCA1-206ENST00000531405 ZNF689Q96CS4 500 aaPredicted RBP21.08■□□□□ 0.97
SSSCA1-206ENST00000531405 MXRA8Q9BRK3 442 aa21.08■□□□□ 0.97
SSSCA1-206ENST00000531405 TRPC6Q9Y210 931 aa21.08■□□□□ 0.97
SSSCA1-206ENST00000531405 MAFGO15525 162 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 RB1P06400 928 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 ARP10275 920 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 NAPAP54920 295 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 PUS10Q3MIT2 529 aaKnown RBP21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 RTN4RL1Q86UN2 441 aaPredicted RBP21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 SGMS1Q86VZ5 419 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 CLP1Q92989 425 aaKnown RBP21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 TCEANC2Q96MN5 208 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 C11orf84Q9BUA3 381 aaPredicted RBP21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 AZI2Q9H6S1 392 aa21.07■□□□□ 0.96
SSSCA1-206ENST00000531405 RRN3P2A6NIE6 340 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 DGKIO75912 1065 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 LTBRP36941 435 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 ACTR2P61160 394 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 HYAL1Q12794 435 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 PLCB4Q15147 1175 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 CLUL1Q15846 466 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 APOA5Q6Q788 366 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 RWDD3Q9Y3V2 267 aa21.06■□□□□ 0.96
SSSCA1-206ENST00000531405 POTEB3A0JP26 581 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 GTF2F1P35269 517 aaKnown RBP eCLIP21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 DLX2Q07687 328 aaPredicted RBP21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 ITGB3BPQ13352 177 aaPredicted RBP21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 IER5Q5VY09 327 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 POTEBQ6S5H4 581 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 SYNE3Q6ZMZ3 975 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 SKAP1Q86WV1 359 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 ALG13Q9NP73 1137 aaKnown RBP21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 RIC8AQ9NPQ8 531 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 TMEM260Q9NX78 707 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 BRPF3Q9ULD4 1205 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 TRPV2Q9Y5S1 764 aa21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 MRPL42Q9Y6G3 142 aaKnown RBP21.05■□□□□ 0.96
SSSCA1-206ENST00000531405 NFASCO94856 1347 aa21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 ZP2Q05996 745 aa21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 PAN2Q504Q3 1202 aaKnown RBP21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 ANO3Q9BYT9 981 aa21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 LMAN2LQ9H0V9 348 aa21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 IGFLR1Q9H665 355 aa21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 AGO4Q9HCK5 861 aaKnown RBP21.04■□□□□ 0.96
SSSCA1-206ENST00000531405 PADI3Q9ULW8 664 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms