RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 RPA1P27694 616 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 LONRF3Q496Y0 759 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 UTP14CQ5TAP6 766 aaKnown RBP21.34■■□□□ 1.01
SMPD1-205ENST00000531303 ABHD15Q6UXT9 468 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 RDM1Q8NG50 284 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 SEPT1Q8WYJ6 367 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 GPR20Q99678 358 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 HSD17B14Q9BPX1 270 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 POLR3CQ9BUI4 534 aaPredicted RBP21.34■■□□□ 1.01
SMPD1-205ENST00000531303 DDX19AQ9NUU7 478 aaKnown RBP21.34■■□□□ 1.01
SMPD1-205ENST00000531303 GNEQ9Y223 722 aaKnown RBP21.34■■□□□ 1.01
SMPD1-205ENST00000531303 KDM3AQ9Y4C1 1321 aa21.34■■□□□ 1.01
SMPD1-205ENST00000531303 P4HBP07237 508 aaKnown RBP21.33■■□□□ 1.01
SMPD1-205ENST00000531303 TCF7P36402 384 aaPredicted RBP21.33■■□□□ 1.01
SMPD1-205ENST00000531303 UGCGQ16739 394 aa21.33■■□□□ 1.01
SMPD1-205ENST00000531303 SKOR2Q2VWA4 1001 aaPredicted RBP21.33■■□□□ 1.01
SMPD1-205ENST00000531303 TLK2Q86UE8 772 aa21.33■■□□□ 1.01
SMPD1-205ENST00000531303 IQUBQ8NA54 791 aa21.33■■□□□ 1.01
SMPD1-205ENST00000531303 LXNQ9BS40 222 aa21.33■■□□□ 1.01
SMPD1-205ENST00000531303 AP5M1Q9H0R1 490 aa21.33■■□□□ 1.01
SMPD1-205ENST00000531303 TUFT1Q9NNX1 390 aa21.33■■□□□ 1.01
SMPD1-205ENST00000531303 MYCP01106 439 aaPredicted RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 QARSP47897 775 aaKnown RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 IRX5P78411 483 aaPredicted RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 DHX8Q14562 1220 aaKnown RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 TMEM119Q4V9L6 283 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 KCNK18Q7Z418 384 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 CCDC60Q8IWA6 550 aaPredicted RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 LRRC15Q8TF66 581 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 WRAP73Q9P2S5 460 aaPredicted RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 SEPT4O43236 478 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 ATG7O95352 703 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 PSMC5P62195 406 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 PSMC6P62333 389 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 CAMK4Q16566 473 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 KLHL40Q2TBA0 621 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 MAP3K21Q5TCX8 1036 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 CAVIN1Q6NZI2 390 aaKnown RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 CTU1Q7Z7A3 348 aaKnown RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 CEP57L1Q8IYX8 460 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 CNNM3Q8NE01 707 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 NEK9Q8TD19 979 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 EMID1Q96A84 441 aaPredicted RBP21.32■■□□□ 1
SMPD1-205ENST00000531303 NT5C3AQ9H0P0 336 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 ZNF302Q9NR11 478 aa21.32■■□□□ 1
SMPD1-205ENST00000531303 E9PMD0 336 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 ZBTB39O15060 712 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 ACTN4O43707 911 aaKnown RBP21.31■■□□□ 1
SMPD1-205ENST00000531303 E2F4Q16254 413 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 NAALADL2Q58DX5 795 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 HYIQ5T013 277 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 KRBA2Q6ZNG9 492 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 GRAMD1CQ8IYS0 662 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 PPTC7Q8NI37 304 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 PIGOQ8TEQ8 1089 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 STAMQ92783 540 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 GLG1Q92896 1179 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 PYM1Q9BRP8 204 aaKnown RBP21.31■■□□□ 1
SMPD1-205ENST00000531303 ZSWIM4Q9H7M6 989 aa21.31■■□□□ 1
SMPD1-205ENST00000531303 SLC26A4O43511 780 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 DUSP11O75319 330 aaKnown RBP21.3■■□□□ 1
SMPD1-205ENST00000531303 MYCNP04198 464 aaPredicted RBP21.3■■□□□ 1
SMPD1-205ENST00000531303 SSBP05455 408 aaKnown RBP eCLIP21.3■■□□□ 1
SMPD1-205ENST00000531303 RARBP10826 455 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 BEX3Q00994 111 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 SLC9C1Q4G0N8 1177 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 FAM160B1Q5W0V3 765 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 PDXDC2PQ6P474 469 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 TRIM50Q86XT4 487 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 CKAP2LQ8IYA6 745 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 ATP6V0A1Q93050 837 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 PCYT2Q99447 389 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 AZI2Q9H6S1 392 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 BLOC1S4Q9NUP1 217 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 DNM3Q9UQ16 869 aa21.3■■□□□ 1
SMPD1-205ENST00000531303 PGK1P00558 417 aa21.29■■□□□ 1
SMPD1-205ENST00000531303 SLFN14P0C7P3 912 aa21.29■■□□□ 1
SMPD1-205ENST00000531303 AFMP43652 599 aa21.29■■□□□ 1
SMPD1-205ENST00000531303 STAT5BP51692 787 aa21.29■■□□□ 1
SMPD1-205ENST00000531303 MCM6Q14566 821 aa21.29■■□□□ 1
SMPD1-205ENST00000531303 RAD54LQ92698 747 aa21.29■■□□□ 1
SMPD1-205ENST00000531303 HMX1Q9NP08 348 aaPredicted RBP21.29■■□□□ 1
SMPD1-205ENST00000531303 IGKV6D-21A0A0A0MT36 114 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 TMEM150BA6NC51 233 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 ZNF862O60290 1169 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 MMP3P08254 477 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 C6orf222P0C671 652 aaPredicted RBP21.28■■□□□ 1
SMPD1-205ENST00000531303 ZNF286BP0CG31 522 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 MARK3P27448 753 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 NACC1Q96RE7 527 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 NUP62CLQ9H1M0 184 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 CLSTN2Q9H4D0 955 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 TMEM63CQ9P1W3 806 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 STK17AQ9UEE5 414 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 DDX20Q9UHI6 824 aaKnown RBP21.28■■□□□ 1
SMPD1-205ENST00000531303 USP25Q9UHP3 1055 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 Q9Y3F1 56 aa21.28■■□□□ 1
SMPD1-205ENST00000531303 LGR5O75473 907 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 PRKCEQ02156 737 aa21.27■■□□□ 1
SMPD1-205ENST00000531303 DGKDQ16760 1214 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms