RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 MCAMP43121 646 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 PRELPP51888 382 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.15□□□□□ -0.945e-6■■■□□ 16.7
CTNND1-227ENST00000530748 CNOT10Q9H9A5 744 aaKnown RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 ATP6V0A4Q9HBG4 840 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 BAG5Q9UL15 447 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 SCINQ9Y6U3 715 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 ALKQ9UM73 1620 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 PRR36Q9H6K5 1346 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 HIP1RO75146 1068 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 LUC7L3O95232 432 aaKnown RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 CRKP46108 304 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 SH3BGRP55822 239 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 DYNLT1P63172 113 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 TNFAIP2Q03169 654 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 ZNF449Q6P9G9 518 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 CPSF3Q9UKF6 684 aaKnown RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 PCDHA6Q9UN73 950 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 PCDHA8Q9Y5H6 950 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 COL15A1P39059 1388 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 CDC42BPAQ5VT25 1732 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 OPHN1O60890 802 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 FTCDO95954 541 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 HOXA13P31271 388 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 ARL13BQ3SXY8 428 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 CFAP61Q8NHU2 1237 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 ZNF341Q9BYN7 854 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 SAMSN1Q9NSI8 373 aaKnown RBP9.15□□□□□ -0.94
CTNND1-227ENST00000530748 CDHR2Q9BYE9 1310 aa9.15□□□□□ -0.94
CTNND1-227ENST00000530748 SASH1O94885 1247 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 SEC31AO94979 1220 aaKnown RBP9.15□□□□□ -0.95
CTNND1-227ENST00000530748 LARGE1O95461 756 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 MXI1P50539 228 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 TTC19Q6DKK2 380 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-227ENST00000530748 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 ARMCX2Q7L311 632 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 RSRC2Q7L4I2 434 aaKnown RBP9.15□□□□□ -0.95
CTNND1-227ENST00000530748 TTLL11Q8NHH1 800 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 RAD54LQ92698 747 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 GCNAQ96QF7 691 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 FTOQ9C0B1 505 aaKnown RBP eCLIP9.15□□□□□ -0.952e-18■□□□□ 11.2
CTNND1-227ENST00000530748 OVOS2A0A0G2JMS6 1433 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 OVOS2A0A0J9YW53 1432 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 PLS3P13797 630 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 CASP2P42575 452 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 DR1Q01658 176 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 NECTIN1Q15223 517 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 OVOS2Q6IE36 1432 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 BCAS4Q8TDM0 211 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 TUBB6Q9BUF5 446 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 LRRC4Q9HBW1 653 aa9.15□□□□□ -0.95
CTNND1-227ENST00000530748 ADGRB3O60242 1522 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 IQCB1Q15051 598 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 SCARA5Q6ZMJ2 495 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 TACO1Q9BSH4 297 aaKnown RBP9.14□□□□□ -0.95
CTNND1-227ENST00000530748 TULP4Q9NRJ4 1543 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 BASP1P80723 227 aaKnown RBP9.14□□□□□ -0.95
CTNND1-227ENST00000530748 Q3C1V9 767 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 EFCAB13Q8IY85 973 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 GPR101Q96P66 508 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-227ENST00000530748 PPP1R16BQ96T49 567 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 NDST4Q9H3R1 872 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
CTNND1-227ENST00000530748 ABCB11O95342 1321 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 GPC4O75487 556 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 CD58P19256 250 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 ARPP19P56211 112 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 PFKFB3Q16875 520 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-227ENST00000530748 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 UNC13DQ70J99 1090 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 HSPH1Q92598 858 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 UBN1Q9NPG3 1134 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 ZBTB5O15062 677 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 ECE2O60344 883 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 RPS6KA4O75676 772 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 PLTPP55058 493 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 ORC2Q13416 577 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-227ENST00000530748 DGKHQ86XP1 1220 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 DNAAF3Q8N9W5 541 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 FAM149B1Q96BN6 582 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 FAM167AQ96KS9 214 aa9.14□□□□□ -0.95
CTNND1-227ENST00000530748 GSTA4O15217 222 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 NDUFA10O95299 355 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 CIITAP33076 1130 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 OSTNP61366 133 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 TSTA3Q13630 321 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 TTLL6Q8N841 843 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 WHAMMQ8TF30 809 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 CEP72Q9P209 647 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 EPS15L1Q9UBC2 864 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 ATP8A1Q9Y2Q0 1164 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 CPDO75976 1380 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 F8W8V4 182 aa9.13□□□□□ -0.95
CTNND1-227ENST00000530748 HSPA8P11142 646 aaKnown RBP9.13□□□□□ -0.95
CTNND1-227ENST00000530748 MARK3P27448 753 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms