RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 CCDC97Q96F63 343 aaPredicted RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 TMEM237Q96Q45 408 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 NFAT5O94916 1531 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 OAS1P00973 400 aaKnown RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 ITGA4P13612 1032 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 IGHMBP2P38935 993 aaKnown RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 PDE6CP51160 858 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 TCIRG1Q13488 830 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 RCN2Q14257 317 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 TSNAXIP1Q2TAA8 658 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 MEI1Q5TIA1 1274 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 CCDC85AQ96PX6 553 aaPredicted RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 SLC52A2Q9HAB3 445 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 CYP39A1Q9NYL5 469 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 SOS2Q07890 1332 aaPredicted RBP15.38■□□□□ 0.05
PCF11-204ENST00000530660 TTI1O43156 1089 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 SUN1O94901 812 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 ACADSP16219 412 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 MCL1Q07820 350 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 ASAP3Q8TDY4 903 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 FERMT2Q96AC1 680 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 TRAPPC9Q96Q05 1148 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 RMND1Q9NWS8 449 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
PCF11-204ENST00000530660 PRDM1O75626 825 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 ALDH1B1P30837 517 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 CACNA2D1P54289 1103 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 MPP3Q13368 585 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 PLIN2Q99541 437 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 RBM47A0AV96 593 aaKnown RBP15.37■□□□□ 0.05
PCF11-204ENST00000530660 PDLIM1O00151 329 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 ENTPD5O75356 428 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 HNRNPH3P31942 346 aaKnown RBP15.37■□□□□ 0.05
PCF11-204ENST00000530660 PSMC4P43686 418 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 USP46P62068 366 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 GBP7Q8N8V2 638 aaPredicted RBP15.37■□□□□ 0.05
PCF11-204ENST00000530660 DDX50Q9BQ39 737 aaKnown RBP15.37■□□□□ 0.05
PCF11-204ENST00000530660 A0A1W2PQJ5 194 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 PSMA7O14818 248 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 WFS1O76024 890 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 ETS2P15036 469 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 KCNA3P22001 575 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 RASIP1Q5U651 963 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 ANKLE1Q8NAG6 615 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 NMRK1Q9NWW6 199 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
PCF11-204ENST00000530660 FAM200BP0CF97 657 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 DIXDC1Q155Q3 683 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 IL17AQ16552 155 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 EIF1ADQ8N9N8 165 aaKnown RBP15.36■□□□□ 0.05
PCF11-204ENST00000530660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCF11-204ENST00000530660 SLX1AQ9BQ83 275 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 PACSIN1Q9BY11 444 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 ZSWIM5Q9P217 1185 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
PCF11-204ENST00000530660 RGS16O15492 202 aaPredicted RBP15.36■□□□□ 0.05
PCF11-204ENST00000530660 SNRPA1P09661 255 aaKnown RBP15.36■□□□□ 0.05
PCF11-204ENST00000530660 KCNA6P17658 529 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 MEX3CQ5U5Q3 659 aaKnown RBP15.36■□□□□ 0.05
PCF11-204ENST00000530660 ANKRD40Q6AI12 368 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 IRGCQ6NXR0 463 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 HOOK3Q86VS8 718 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 SGMS1Q86VZ5 419 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCF11-204ENST00000530660 FAM13CQ8NE31 585 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 PLBD2Q8NHP8 589 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 SCFD2Q8WU76 684 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 ERGIC2Q96RQ1 377 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 EPB41L4BQ9H329 900 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 RXFP1Q9HBX9 757 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
PCF11-204ENST00000530660 ZNF189O75820 626 aaPredicted RBP15.35■□□□□ 0.05
PCF11-204ENST00000530660 CCNFP41002 786 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 DEUP1Q05D60 604 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 MGAT5Q09328 741 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 RTN1Q16799 776 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 DPY19L2Q6NUT2 758 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 LCA5Q86VQ0 697 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 TAF4BQ92750 862 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 TMEM87BQ96K49 555 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 GBP5Q96PP8 586 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 TRIM51Q9BSJ1 452 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 HNRNPRO43390 633 aaKnown RBP15.35■□□□□ 0.05
PCF11-204ENST00000530660 PFDN1O60925 122 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 DEXIO95424 95 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 BAG3O95817 575 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 GNA14O95837 355 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 ASTE1Q2TB18 679 aaPredicted RBP15.35■□□□□ 0.05
PCF11-204ENST00000530660 Q4G0T1 1027 aa15.35■□□□□ 0.05
PCF11-204ENST00000530660 CRACR2BQ8N4Y2 399 aaPredicted RBP15.35■□□□□ 0.05
PCF11-204ENST00000530660 BZW2Q9Y6E2 419 aaKnown RBP15.35■□□□□ 0.05
PCF11-204ENST00000530660 USH1CQ9Y6N9 552 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms