RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 PPP1R11O60927 126 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CABYRO75952 493 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 NR3C2P08235 984 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CYP2C9P11712 490 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 MYCLP12524 364 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 FDPSP14324 419 aaKnown RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 EIF2AK2P19525 551 aaKnown RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 POU3F3P20264 500 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 HOXA13P31271 388 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CLK2P49760 499 aaKnown RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 RABGGTBP53611 331 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CCL23P55773 120 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 ST3GAL1Q11201 340 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 MKRN4PQ13434 485 aaPredicted RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 MTMR1Q13613 665 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 NEDD9Q14511 834 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 STK38Q15208 465 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CALCRLQ16602 461 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 UBE2SQ16763 222 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CEP55Q53EZ4 464 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 TJAP1Q5JTD0 557 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 TTC38Q5R3I4 469 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 HAUS3Q68CZ6 603 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 IQSEC1Q6DN90 963 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 PPP4R3AQ6IN85 833 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 CCDC62Q6P9F0 684 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 USP17L6PQ6QN14 398 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 EEPD1Q7L9B9 569 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 RASSF8Q8NHQ8 419 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 SCFD2Q8WU76 684 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 TBC1D5Q92609 795 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 DHX38Q92620 1227 aaKnown RBP5.4□□□□□ -1.54
SSBP3-213ENST00000530618 COPS5Q92905 334 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 GPRASP2Q96D09 838 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 FAM20AQ96MK3 541 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 PDCD2LQ9BRP1 358 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 WDR11Q9BZH6 1224 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 HIPK3Q9H422 1215 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 TBC1D22BQ9NU19 505 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 RAPGEFL1Q9UHV5 662 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 MRVI1Q9Y6F6 885 aa5.4□□□□□ -1.54
SSBP3-213ENST00000530618 DDX11L8A8MPP1 907 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 NOP56O00567 594 aaKnown RBP5.39□□□□□ -1.55
SSBP3-213ENST00000530618 LPXNO60711 386 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 GAS7O60861 476 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 RGS20O76081 388 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 YEATS4O95619 227 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 BRD1O95696 1058 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 CYP3A4P08684 503 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 ATP2B1P20020 1258 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 MCM7P33993 719 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 KRT76Q01546 638 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 ARHGAP1Q07960 439 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 RBL2Q08999 1139 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 HIC1Q14526 733 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 PGM5Q15124 567 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 INF2Q27J81 1249 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 TRIM71Q2Q1W2 868 aaKnown RBP5.39□□□□□ -1.55
SSBP3-213ENST00000530618 PRR16Q569H4 304 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 MYSM1Q5VVJ2 828 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 ARL6IP4Q66PJ3 421 aaKnown RBP5.39□□□□□ -1.55
SSBP3-213ENST00000530618 DTHD1Q6ZMT9 781 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 OTOP2Q7RTS6 562 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 PLA2G4DQ86XP0 818 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 TMEM199Q8N511 208 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 RDM1Q8NG50 284 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 KAT2BQ92831 832 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 WNT8BQ93098 351 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 CDK5RAP3Q96JB5 506 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 SPATA32Q96LK8 384 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 CCDC43Q96MW1 224 aaKnown RBP5.39□□□□□ -1.55
SSBP3-213ENST00000530618 AIFM3Q96NN9 605 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 ZNF577Q9BSK1 485 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 TEKT3Q9BXF9 490 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 AP5M1Q9H0R1 490 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 MLXIPQ9HAP2 919 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 JADE2Q9NQC1 790 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 FAM13BQ9NYF5 915 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 HOOK1Q9UJC3 728 aaKnown RBP5.39□□□□□ -1.55
SSBP3-213ENST00000530618 MTMR6Q9Y217 621 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 FRMPD4Q14CM0 1322 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 KDM3AQ9Y4C1 1321 aa5.39□□□□□ -1.55
SSBP3-213ENST00000530618 TTC3P53804 2025 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 CYP3A7-CYP3A51PA0A087WV96 503 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 LCHNA4D1U4 455 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 WDR64B1ANS9 1081 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 HAS3O00219 553 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 RFXAPO00287 272 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SLC26A4O43511 780 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 GALR2O43603 387 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 KPNA6O60684 536 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 FGBP02675 491 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 OR52Z1P0C646 297 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 HOXD8P13378 290 aaPredicted RBP5.38□□□□□ -1.55
SSBP3-213ENST00000530618 BMP1P13497 986 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 CYP3A7P24462 503 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 SFNP31947 248 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 CIITAP33076 1130 aa5.38□□□□□ -1.55
SSBP3-213ENST00000530618 PRPHP41219 470 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms