RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 NLRC5Q86WI3 1866 aa23.85■■□□□ 1.41
SMPD1-204ENST00000530395 CDC27P30260 824 aa23.85■■□□□ 1.41
SMPD1-204ENST00000530395 SP7Q8TDD2 431 aaPredicted RBP23.85■■□□□ 1.41
SMPD1-204ENST00000530395 TOP1MTQ969P6 601 aa23.85■■□□□ 1.41
SMPD1-204ENST00000530395 CCDC136Q96JN2 1154 aa23.85■■□□□ 1.41
SMPD1-204ENST00000530395 JAKMIP1Q96N16 626 aaKnown RBP23.85■■□□□ 1.41
SMPD1-204ENST00000530395 SAMD11Q96NU1 681 aa23.85■■□□□ 1.41
SMPD1-204ENST00000530395 COL4A6Q14031 1691 aa23.85■■□□□ 1.41
SMPD1-204ENST00000530395 RALGAPA2Q2PPJ7 1873 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 MBLAC1A4D2B0 266 aaPredicted RBP23.84■■□□□ 1.41
SMPD1-204ENST00000530395 RRN3P2A6NIE6 340 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 RBAK-RBAKDNI3L0D1 243 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 UPP2O95045 317 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 CHRNA1P02708 482 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 ZNF76P36508 570 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 SREBF1P36956 1147 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 IGBP1P78318 339 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 BLOC1S2Q6QNY1 142 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 Q6ZUG5 572 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 FBXO22Q8NEZ5 403 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 CYP2W1Q8TAV3 490 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 KCNB2Q92953 911 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 HLA-CQ95604 372 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 OSBPL7Q9BZF2 842 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 FAM217BQ9NTX9 383 aaPredicted RBP23.84■■□□□ 1.41
SMPD1-204ENST00000530395 TRPC6Q9Y210 931 aa23.84■■□□□ 1.41
SMPD1-204ENST00000530395 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.83■■□□□ 1.41
SMPD1-204ENST00000530395 GHRP10912 638 aa23.83■■□□□ 1.41
SMPD1-204ENST00000530395 CLK2P49760 499 aaKnown RBP23.83■■□□□ 1.41
SMPD1-204ENST00000530395 ACTR2P61160 394 aa23.83■■□□□ 1.41
SMPD1-204ENST00000530395 APOBRQ0VD83 1088 aa23.83■■□□□ 1.41
SMPD1-204ENST00000530395 PFKFB3Q16875 520 aaPredicted RBP23.83■■□□□ 1.41
SMPD1-204ENST00000530395 CCDC12Q8WUD4 166 aaPredicted RBP23.83■■□□□ 1.41
SMPD1-204ENST00000530395 DNAJB3Q8WWF6 145 aa23.83■■□□□ 1.41
SMPD1-204ENST00000530395 C17orf80Q9BSJ5 609 aa23.83■■□□□ 1.41
SMPD1-204ENST00000530395 AGO4Q9HCK5 861 aaKnown RBP23.83■■□□□ 1.41
SMPD1-204ENST00000530395 TMEM260Q9NX78 707 aa23.83■■□□□ 1.41
SMPD1-204ENST00000530395 ARP10275 920 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 BMP1P13497 986 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 SCG2P13521 617 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 INSRRP14616 1297 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 CPA1P15085 419 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 HSPA4P34932 840 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 ADD1P35611 737 aaKnown RBP23.82■■□□□ 1.4
SMPD1-204ENST00000530395 MGAT3Q09327 533 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 MARCH8Q5T0T0 291 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 NIPA1Q7RTP0 329 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 PLPPR4Q7Z2D5 763 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 BRF1Q92994 677 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 PCYT2Q99447 389 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 SNX14Q9Y5W7 946 aa23.82■■□□□ 1.4
SMPD1-204ENST00000530395 NID2Q14112 1375 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 BRWD1Q9NSI6 2320 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 MEIS1O00470 390 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 REC8O95072 547 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 STAT5BP51692 787 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 KCNQ1P51787 676 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 MRPS6P82932 125 aaKnown RBP23.81■■□□□ 1.4
SMPD1-204ENST00000530395 ITGB3BPQ13352 177 aaPredicted RBP23.81■■□□□ 1.4
SMPD1-204ENST00000530395 MCTP2Q6DN12 878 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 CDY2AQ9Y6F7 541 aa23.81■■□□□ 1.4
SMPD1-204ENST00000530395 ESYT2A0FGR8 921 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 M0QZ92 97 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 SLC26A2P50443 739 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 LPIN1Q14693 890 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 FBXO47Q5MNV8 452 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 IER5Q5VY09 327 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 JAKMIP3Q5VZ66 844 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 FAM49AQ9H0Q0 323 aaPredicted RBP23.8■■□□□ 1.4
SMPD1-204ENST00000530395 C6orf50Q9HD87 102 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 LOXHD1Q8IVV2 1947 aa23.8■■□□□ 1.4
SMPD1-204ENST00000530395 RPS6KB1P23443 525 aa23.79■■□□□ 1.4
SMPD1-204ENST00000530395 PSMA5P28066 241 aa23.79■■□□□ 1.4
SMPD1-204ENST00000530395 AKAP17AQ02040 695 aaKnown RBP23.79■■□□□ 1.4
SMPD1-204ENST00000530395 PLCB4Q15147 1175 aa23.79■■□□□ 1.4
SMPD1-204ENST00000530395 PTPROQ16827 1216 aa23.79■■□□□ 1.4
SMPD1-204ENST00000530395 EPC2Q52LR7 807 aa23.79■■□□□ 1.4
SMPD1-204ENST00000530395 TSHZ1Q6ZSZ6 1077 aa23.79■■□□□ 1.4
SMPD1-204ENST00000530395 REXO1Q8N1G1 1221 aaKnown RBP23.79■■□□□ 1.4
SMPD1-204ENST00000530395 FAM160B1Q5W0V3 765 aa23.78■■□□□ 1.4
SMPD1-204ENST00000530395 PLA2G4DQ86XP0 818 aa23.78■■□□□ 1.4
SMPD1-204ENST00000530395 FBXL16Q8N461 479 aa23.78■■□□□ 1.4
SMPD1-204ENST00000530395 IL17RAQ96F46 866 aa23.78■■□□□ 1.4
SMPD1-204ENST00000530395 ZMYND12Q9H0C1 365 aa23.78■■□□□ 1.4
SMPD1-204ENST00000530395 PCDHA2Q9Y5H9 948 aa23.78■■□□□ 1.4
SMPD1-204ENST00000530395 POTEB3A0JP26 581 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 DDX39AO00148 427 aaKnown RBP23.77■■□□□ 1.4
SMPD1-204ENST00000530395 BACH1O14867 736 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 PRPF3O43395 683 aaKnown RBP23.77■■□□□ 1.4
SMPD1-204ENST00000530395 ATG7O95352 703 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 GNA11P29992 359 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 POTEBQ6S5H4 581 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 TMEM192Q8IY95 271 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 FIBCD1Q8N539 461 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 MRPL38Q96DV4 380 aaKnown RBP23.77■■□□□ 1.4
SMPD1-204ENST00000530395 NECAB3Q96P71 396 aaPredicted RBP23.77■■□□□ 1.4
SMPD1-204ENST00000530395 TRPV2Q9Y5S1 764 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 SQORQ9Y6N5 450 aa23.77■■□□□ 1.4
SMPD1-204ENST00000530395 MYH9P35579 1960 aaKnown RBP23.77■■□□□ 1.4
SMPD1-204ENST00000530395 TTC3P53804 2025 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms