RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SPATA31C2B4DYI2 1134 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 M0QZ92 97 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
COPB1-207ENST00000529866 GLP2RO95838 553 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 DNAJB1P25685 340 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 PDE1AP54750 535 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 UBE3AQ05086 875 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 IMMTQ16891 758 aaKnown RBP12.04□□□□□ -0.48
COPB1-207ENST00000529866 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
COPB1-207ENST00000529866 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 NEK1Q96PY6 1258 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 SENP7Q9BQF6 1050 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 CNNM2Q9H8M5 875 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 CDY2AQ9Y6F7 541 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 FRMPD4Q14CM0 1322 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 MYO15AQ9UKN7 3530 aa12.04□□□□□ -0.48
COPB1-207ENST00000529866 PROB1E7EW31 1015 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 H0Y858 1186 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 MRPS6P82932 125 aaKnown RBP12.03□□□□□ -0.48
COPB1-207ENST00000529866 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
COPB1-207ENST00000529866 GRIK4Q16099 956 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 PAN2Q504Q3 1202 aaKnown RBP12.03□□□□□ -0.48
COPB1-207ENST00000529866 IER5Q5VY09 327 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 XRRA1Q6P2D8 792 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 NLRX1Q86UT6 975 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 DNAJB3Q8WWF6 145 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 SUSD6Q92537 303 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 BCAS3Q9H6U6 928 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 TLR9Q9NR96 1032 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 AAASQ9NRG9 546 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 ERAP1Q9NZ08 941 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 RTEL1Q9NZ71 1219 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 ZSWIM5Q9P217 1185 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 LRFN2Q9ULH4 789 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 PCDHB12Q9Y5F1 795 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 SQORQ9Y6N5 450 aa12.03□□□□□ -0.48
COPB1-207ENST00000529866 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 SCG2P13521 617 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 CD52P31358 61 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 MRPS9P82933 396 aaKnown RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 PAK2Q13177 524 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 SEMA3FQ13275 785 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 ERMP1Q7Z2K6 904 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 GLG1Q92896 1179 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 RILPL2Q969X0 211 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 CDHR1Q96JP9 859 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 LNPKQ9C0E8 428 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 RNF216Q9NWF9 866 aaPredicted RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 SUPT16HQ9Y5B9 1047 aaKnown RBP12.02□□□□□ -0.49
COPB1-207ENST00000529866 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.49
COPB1-207ENST00000529866 PNMA6FA0A0J9YX94 578 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 PALM3A6NDB9 673 aaPredicted RBP12.01□□□□□ -0.49
COPB1-207ENST00000529866 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 IGHDP01880 384 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 MARK3P27448 753 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 MTMR3Q13615 1198 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 DUSP6Q16828 381 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 PCNX4Q63HM2 1172 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 PDE12Q6L8Q7 609 aaKnown RBP12.01□□□□□ -0.49
COPB1-207ENST00000529866 FAM43BQ6ZT52 329 aaPredicted RBP12.01□□□□□ -0.49
COPB1-207ENST00000529866 ATP8B4Q8TF62 1192 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 SEPT1Q8WYJ6 367 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
COPB1-207ENST00000529866 CUL5Q93034 780 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 RIPOR3Q96MK2 946 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 PIGSQ96S52 555 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 FAM49AQ9H0Q0 323 aaPredicted RBP12.01□□□□□ -0.49
COPB1-207ENST00000529866 AGO3Q9H9G7 860 aaKnown RBP12.01□□□□□ -0.49
COPB1-207ENST00000529866 NR2E1Q9Y466 385 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 TRPV2Q9Y5S1 764 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 LAMA4Q16363 1823 aa12.01□□□□□ -0.49
COPB1-207ENST00000529866 PRR23AA6NEV1 266 aa12□□□□□ -0.49
COPB1-207ENST00000529866 RRN3P2A6NIE6 340 aa12□□□□□ -0.49
COPB1-207ENST00000529866 PER2O15055 1255 aa12□□□□□ -0.49
COPB1-207ENST00000529866 IGBP1P78318 339 aa12□□□□□ -0.49
COPB1-207ENST00000529866 MCTP2Q6DN12 878 aa12□□□□□ -0.49
COPB1-207ENST00000529866 SMC5Q8IY18 1101 aa12□□□□□ -0.49
COPB1-207ENST00000529866 UBALD2Q8IYN6 164 aa12□□□□□ -0.49
COPB1-207ENST00000529866 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
COPB1-207ENST00000529866 CRIPAKQ8N1N5 446 aa12□□□□□ -0.49
COPB1-207ENST00000529866 EXOC6Q8TAG9 804 aa12□□□□□ -0.49
COPB1-207ENST00000529866 SMARCC2Q8TAQ2 1214 aa12□□□□□ -0.49
COPB1-207ENST00000529866 GPRASP2Q96D09 838 aa12□□□□□ -0.49
COPB1-207ENST00000529866 DSCC1Q9BVC3 393 aa12□□□□□ -0.49
COPB1-207ENST00000529866 SMARCAD1Q9H4L7 1026 aa12□□□□□ -0.49
COPB1-207ENST00000529866 RIOX1Q9H6W3 641 aa12□□□□□ -0.49
COPB1-207ENST00000529866 DIAPH3Q9NSV4 1193 aa12□□□□□ -0.49
COPB1-207ENST00000529866 PADI3Q9ULW8 664 aa12□□□□□ -0.49
COPB1-207ENST00000529866 PCDHGC5Q9Y5F6 944 aa12□□□□□ -0.49
COPB1-207ENST00000529866 TTC3P53804 2025 aa11.99□□□□□ -0.49
COPB1-207ENST00000529866 HIP1O00291 1037 aa11.99□□□□□ -0.49
COPB1-207ENST00000529866 HOXB8P17481 243 aaPredicted RBP11.99□□□□□ -0.49
COPB1-207ENST00000529866 SDSP20132 328 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms