RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 MCF2LO15068 1137 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SART1O43290 800 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 KDM1AO60341 852 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 NMT2O60551 498 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MMP20O60882 483 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TADA3O75528 432 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TIPRLO75663 272 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 GFPT2O94808 682 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 FARP2O94887 1054 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SNUPNO95149 360 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 CNOT4O95628 575 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 IL33O95760 270 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 BAG2O95816 211 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 EGFRP00533 1210 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RPLP1P05386 114 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PSAPP07602 524 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PCP11498 1178 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TRIM27P14373 513 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ATF4P18848 351 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 YY1P25490 414 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MZF1P28698 734 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 GALNSP34059 522 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 HOXD12P35452 270 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 KRT20P35900 424 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MAP2K2P36507 400 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MAN2A2P49641 1150 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SEPHS1P49903 392 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 CCNHP51946 323 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PURAQ00577 322 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 CYP4A11Q02928 519 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SEMA3AQ14563 771 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 IQCB1Q15051 598 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RABEP1Q15276 862 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PROSER3Q2NL68 480 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 NBPF8Q3BBV2 869 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 C8orf34Q49A92 452 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 VWA3BQ502W6 1294 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 FAM26DQ5JW98 314 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SPATA1Q5VX52 437 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 KAZNQ674X7 775 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 NAIF1Q69YI7 327 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TRIM68Q6AZZ1 485 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PDE12Q6L8Q7 609 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TATDN1Q6P1N9 297 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 LILRA6Q6PI73 481 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TMCO3Q6UWJ1 677 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ADAMTSL4Q6UY14 1074 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ATF7IPQ6VMQ6 1270 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SEPT14Q6ZU15 432 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TOGARAM2Q6ZUX3 1019 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 INTS8Q75QN2 995 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 OTOP3Q7RTS5 596 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 CCDC186Q7Z3E2 898 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ARMC9Q7Z3E5 817 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 HOMER1Q86YM7 354 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RPAP2Q8IXW5 612 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TCEAL8Q8IYN2 117 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 C7orf61Q8IZ16 206 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RGL4Q8IZJ4 473 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ZNF654Q8IZM8 581 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 GBP7Q8N8V2 638 aaPredicted RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MSANTD4Q8NCY6 345 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RNF214Q8ND24 703 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ANKRD20A12PQ8NF67 263 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TRIM58Q8NG06 486 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 RASSF8Q8NHQ8 419 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MGARPQ8TDB4 240 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TBC1D5Q92609 795 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SGCDQ92629 289 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 EPSTI1Q96J88 318 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 CITED4Q96RK1 184 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 OSBPL10Q9BXB5 764 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 KRTAP9-8Q9BYQ0 159 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SLC13A1Q9BZW2 595 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 VCX3BQ9H321 246 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 VCPKMTQ9H867 229 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 NCOA5Q9HCD5 579 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ALG13Q9NP73 1137 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 NLRC4Q9NPP4 1024 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PLCB1Q9NQ66 1216 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 STARD7Q9NQZ5 370 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PAPOLBQ9NRJ5 636 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ANKEF1Q9NU02 776 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 CCDC87Q9NVE4 849 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SNTG2Q9NY99 539 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 IL20Q9NYY1 176 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SIRPGQ9P1W8 387 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 WDR35Q9P2L0 1181 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 STK39Q9UEW8 545 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 GIMAP2Q9UG22 337 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 ZC3H7BQ9UGR2 993 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 POLIQ9UNA4 740 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 TRAF3IP3Q9Y228 551 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 FNDC3AQ9Y2H6 1198 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 USP20Q9Y2K6 914 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 HIF3AQ9Y2N7 669 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 MRPL11Q9Y3B7 192 aaKnown RBP3.11□□□□□ -1.91
FDFT1-216ENST00000529521 PCDHGB7Q9Y5F8 929 aa3.11□□□□□ -1.91
FDFT1-216ENST00000529521 SPO11Q9Y5K1 396 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms