RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PRAMEF25A6NGN4 478 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 NPTXRO95502 500 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 F2P00734 622 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 MMEP08473 750 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 CYP2C8P10632 490 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 SLC9A1P19634 815 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 PTX3P26022 381 aaPredicted RBP6.67□□□□□ -1.34
CTR9-204ENST00000529355 MC4RP32245 332 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 FLT3P36888 993 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 NKX3-2P78367 333 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 DSG1Q02413 1049 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 DLX2Q07687 328 aaPredicted RBP6.67□□□□□ -1.34
CTR9-204ENST00000529355 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 CD276Q5ZPR3 534 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 CNKSR3Q6P9H4 555 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 NLGN4XQ8N0W4 816 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 TTLL11Q8NHH1 800 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
CTR9-204ENST00000529355 ZBTB8AQ96BR9 441 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 C11orf84Q9BUA3 381 aaPredicted RBP6.67□□□□□ -1.34
CTR9-204ENST00000529355 IRF2BPLQ9H1B7 796 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 MS4A5Q9H3V2 200 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 OXSMQ9NWU1 459 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 THG1LQ9NWX6 298 aaKnown RBP6.67□□□□□ -1.34
CTR9-204ENST00000529355 B3GALT1Q9Y5Z6 326 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 NCANO14594 1321 aa6.67□□□□□ -1.34
CTR9-204ENST00000529355 LCHNA4D1U4 455 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 STAT3P40763 770 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 HTRA3P83110 453 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 PFKPQ01813 784 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 CATSPEREQ5SY80 951 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 EP400NLQ6ZTU2 488 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 LHFPL2Q6ZUX7 228 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 GPR101Q96P66 508 aaPredicted RBP6.66□□□□□ -1.34
CTR9-204ENST00000529355 PPP1R16BQ96T49 567 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 BOCQ9BWV1 1114 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 CABP5Q9NP86 173 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 SPTLC3Q9NUV7 552 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 IFT57Q9NWB7 429 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 PMF1-BGLAPU3KQ54 211 aa6.66□□□□□ -1.34
CTR9-204ENST00000529355 PRRG2O14669 202 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 FFAR3O14843 346 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 CLSTN1O94985 981 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 APPP05067 770 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 CFPP27918 469 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 ADCYAP1R1P41586 468 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 GLRBP48167 497 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 KIF11P52732 1056 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 DBPQ10586 325 aaPredicted RBP6.65□□□□□ -1.34
CTR9-204ENST00000529355 STRN3Q13033 797 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 VWA3BQ502W6 1294 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 PPM1KQ8N3J5 372 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 DACT3Q96B18 629 aaPredicted RBP6.65□□□□□ -1.34
CTR9-204ENST00000529355 ELF4Q99607 663 aaPredicted RBP6.65□□□□□ -1.34
CTR9-204ENST00000529355 ORAI3Q9BRQ5 295 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 BTBD7Q9P203 1132 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 MAPRE3Q9UPY8 281 aa6.65□□□□□ -1.34
CTR9-204ENST00000529355 SHROOM4Q9ULL8 1493 aa6.65□□□□□ -1.35
CTR9-204ENST00000529355 TGM5O43548 720 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 MPIG6BO95866 241 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 IL18BPO95998 194 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 ZC3H18Q86VM9 953 aaKnown RBP6.64□□□□□ -1.35
CTR9-204ENST00000529355 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 KIAA1958Q8N8K9 716 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 TP53I13Q8NBR0 393 aaPredicted RBP6.64□□□□□ -1.35
CTR9-204ENST00000529355 SMC1BQ8NDV3 1235 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 ASB15Q8WXK1 588 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 ERCC4Q92889 916 aaPredicted RBP6.64□□□□□ -1.35
CTR9-204ENST00000529355 KCNH7Q9NS40 1196 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 UCKL1Q9NWZ5 548 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 HSPBP1Q9NZL4 362 aa6.64□□□□□ -1.35
CTR9-204ENST00000529355 ZNF839A8K0R7 811 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 NEMP1O14524 444 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 NUAK1O60285 661 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 VIL1P09327 827 aaKnown RBP6.63□□□□□ -1.35
CTR9-204ENST00000529355 MLLT6P55198 1093 aaPredicted RBP6.63□□□□□ -1.35
CTR9-204ENST00000529355 RBM10P98175 930 aaKnown RBP6.63□□□□□ -1.35
CTR9-204ENST00000529355 PKN1Q16512 942 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 SKIDA1Q1XH10 827 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 ESRP1Q6NXG1 681 aaKnown RBP6.63□□□□□ -1.35
CTR9-204ENST00000529355 LRSAM1Q6UWE0 723 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 ANKLE2Q86XL3 938 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 DTX3Q8N9I9 347 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 KYQ8NBH2 561 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 AMNQ9BXJ7 453 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 CAAP1Q9H8G2 361 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.63□□□□□ -1.35
CTR9-204ENST00000529355 CROTQ9UKG9 612 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 NUB1Q9Y5A7 615 aa6.63□□□□□ -1.35
CTR9-204ENST00000529355 PRAMEF22A3QJZ6 481 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 FOXP2O15409 715 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 AOAHP28039 575 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 SCNN1BP51168 640 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 ARHGAP44Q17R89 818 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 PRAMEF18Q5VWM3 479 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 VASNQ6EMK4 673 aa6.62□□□□□ -1.35
CTR9-204ENST00000529355 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
CTR9-204ENST00000529355 KRT26Q7Z3Y9 468 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms