RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 SARM1Q6SZW1 724 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.17□□□□□ -0.945e-6■■■□□ 16.7
CTNND1-219ENST00000528621 PDE11AQ9HCR9 933 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 PCDHB6Q9Y5E3 794 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 ABCB11O95342 1321 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 RPS6KA4O75676 772 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 ADRA2BP18089 450 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 THOC5Q13769 683 aaKnown RBP9.17□□□□□ -0.94
CTNND1-219ENST00000528621 UNC13DQ70J99 1090 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 ARMCX2Q7L311 632 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 CFAP36Q96G28 342 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 SOWAHDA6NJG2 315 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 SART1O43290 800 aaKnown RBP9.17□□□□□ -0.94
CTNND1-219ENST00000528621 BAG2O95816 211 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 DDIT3P35638 169 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 STX1BP61266 288 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 TFAMQ00059 246 aaKnown RBP9.17□□□□□ -0.94
CTNND1-219ENST00000528621 RASGRF1Q13972 1273 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 CTTNQ14247 550 aaKnown RBP9.17□□□□□ -0.94
CTNND1-219ENST00000528621 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 CIAPIN1Q6FI81 312 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 ELMSAN1Q6PJG2 1045 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 PCGF5Q86SE9 256 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 DEPDC1BQ8WUY9 529 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
CTNND1-219ENST00000528621 ARHGEF40Q8TER5 1519 aa9.17□□□□□ -0.94
CTNND1-219ENST00000528621 COG7P83436 770 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 PDE1BQ01064 536 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SNCBQ16143 134 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 GBP7Q8N8V2 638 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 HEXIM2Q96MH2 286 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 TNS3Q68CZ2 1445 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 NEDD4P46934 1319 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 ESYT2A0FGR8 921 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 LRRN2O75325 713 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 NR5A1Q13285 461 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 PFKFB3Q16875 520 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 ARL13BQ3SXY8 428 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 OR6B2Q6IFH4 312 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 TTLL11Q8NHH1 800 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 EPB41L5Q9HCM4 733 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 CEP72Q9P209 647 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 FBXO40Q9UH90 709 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 NRBP1Q9UHY1 535 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 PRPSAP2O60256 369 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 MYL3P08590 195 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SNAP25P60880 206 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 ALX1Q15699 326 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 TBC1D10BQ4KMP7 808 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 RC3H1Q5TC82 1133 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SMYD2Q9NRG4 433 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SRP68Q9UHB9 627 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 PRR36Q9H6K5 1346 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 GOLGA8SH3BPF8 625 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 PRELPP51888 382 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 PI16Q6UXB8 463 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 RYBPQ8N488 228 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 BAG5Q9UL15 447 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 RAD17O75943 681 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SERPINB6P35237 376 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 COPB2P35606 906 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 EIF4A3P38919 411 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 RNF207Q6ZRF8 634 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 MIGA2Q7L4E1 593 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 CCNYQ8ND76 341 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 STRBPQ96SI9 672 aaKnown RBP9.16□□□□□ -0.94
CTNND1-219ENST00000528621 NDST4Q9H3R1 872 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 ATP6V0A4Q9HBG4 840 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 DONSONQ9NYP3 566 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 EPS15L1Q9UBC2 864 aa9.16□□□□□ -0.94
CTNND1-219ENST00000528621 SPATA31A3Q5VYP0 1347 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 CYP2D7A0A087X1C5 515 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 SASH1O94885 1247 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 PLEKHA8P1O95397 391 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 CIITAP33076 1130 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 MCAMP43121 646 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 MXI1P50539 228 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 GRM4Q14833 912 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 RAD54LQ92698 747 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.15□□□□□ -0.94
CTNND1-219ENST00000528621 ZBTB5O15062 677 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 NDUFA10O95299 355 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 PPARGP37231 505 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-219ENST00000528621 CRKP46108 304 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 DYNLT1P63172 113 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 KYAT1Q16773 422 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 ANKRD13CQ8N6S4 541 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 CPSF3Q9UKF6 684 aaKnown RBP9.15□□□□□ -0.94
CTNND1-219ENST00000528621 PCDHA6Q9UN73 950 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 PCDHA8Q9Y5H6 950 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 COL15A1P39059 1388 aa9.15□□□□□ -0.94
CTNND1-219ENST00000528621 OPHN1O60890 802 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms