RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 AVPR2P30518 371 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 MCM5P33992 734 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 VSIG10LQ86VR7 867 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 TMEM87BQ96K49 555 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 RPGRIP1Q96KN7 1286 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 PDCD2LQ9BRP1 358 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 PHF7Q9BWX1 381 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-203ENST00000527916 LY9Q9HBG7 655 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 ZNF215Q9UL58 517 aaPredicted RBP12.13□□□□□ -0.47
CPSF1-203ENST00000527916 DCHS1Q96JQ0 3298 aa12.13□□□□□ -0.47
CPSF1-203ENST00000527916 FSD2A1L4K1 749 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 PROB1E7EW31 1015 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 SLC27A2O14975 620 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 RGS20O76081 388 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 DDAH1O94760 285 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
CPSF1-203ENST00000527916 CCND2P30279 289 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 ICAM3P32942 547 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 LIFRP42702 1097 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
CPSF1-203ENST00000527916 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 PIGSQ96S52 555 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 RC3H2Q9HBD1 1191 aaKnown RBP12.12□□□□□ -0.47
CPSF1-203ENST00000527916 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
CPSF1-203ENST00000527916 GVINP1Q7Z2Y8 2422 aa12.12□□□□□ -0.47
CPSF1-203ENST00000527916 DMDP11532 3685 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 H0Y858 1186 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ENPP3O14638 875 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 PRC1O43663 620 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 CALM1P0DP23 149 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 CALM2P0DP24 149 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 CALM3P0DP25 149 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 GHRP10912 638 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-203ENST00000527916 KIF5BP33176 963 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 NRIP1P48552 1158 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 GNAQP50148 359 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ARHGAP4P98171 946 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 SP2Q02086 613 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 CAMK1Q14012 370 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 NEDD9Q14511 834 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 CREB3L3Q68CJ9 461 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 TAF2Q6P1X5 1199 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ZBTB33Q86T24 672 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ZNF654Q8IZM8 581 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 CTCFLQ8NI51 663 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ZNF689Q96CS4 500 aaPredicted RBP12.11□□□□□ -0.47
CPSF1-203ENST00000527916 ASIC4Q96FT7 647 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 TLE6Q9H808 572 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
CPSF1-203ENST00000527916 GCOM1H8Y6P7 765 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-203ENST00000527916 SH2B2O14492 632 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-203ENST00000527916 DGKIO75912 1065 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 CHRNA1P02708 482 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 ITGB1P05556 798 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 POLR2MP0CAP2 368 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 PGM5Q15124 567 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 PTPN21Q16825 1174 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 TSGA10IPQ3SY00 556 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 METTL7BQ6UX53 244 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 RBM23Q86U06 439 aaKnown RBP12.1□□□□□ -0.47
CPSF1-203ENST00000527916 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 CMTR2Q8IYT2 770 aaKnown RBP12.1□□□□□ -0.47
CPSF1-203ENST00000527916 KLHL23Q8NBE8 558 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 SPPL3Q8TCT6 385 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 ANO2Q9NQ90 1003 aa12.1□□□□□ -0.47
CPSF1-203ENST00000527916 BARX2Q9UMQ3 279 aaPredicted RBP12.1□□□□□ -0.47
CPSF1-203ENST00000527916 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 GALR2O43603 387 aaPredicted RBP12.09□□□□□ -0.47
CPSF1-203ENST00000527916 STAM2O75886 525 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 SRGAP2BP0DMP2 458 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 DNAJB1P25685 340 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 LPIN1Q14693 890 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 MICAL1Q8TDZ2 1067 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 POF1BQ8WVV4 589 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 RRP36Q96EU6 259 aaKnown RBP12.09□□□□□ -0.47
CPSF1-203ENST00000527916 RIPOR3Q96MK2 946 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
CPSF1-203ENST00000527916 MRPL42Q9Y6G3 142 aaKnown RBP12.09□□□□□ -0.47
CPSF1-203ENST00000527916 PIK3CDO00329 1044 aa12.08□□□□□ -0.48
CPSF1-203ENST00000527916 GLP2RO95838 553 aa12.08□□□□□ -0.48
CPSF1-203ENST00000527916 RPLP2P05387 115 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms