RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SLC9A2Q9UBY0 812 aa16.46■□□□□ 0.22
USP47-207ENST00000527733 IKBKGQ9Y6K9 419 aa16.46■□□□□ 0.22
USP47-207ENST00000527733 CEP104O60308 925 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 RBL2Q08999 1139 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 CALCOCO2Q13137 446 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 GTF3C2Q8WUA4 911 aaPredicted RBP16.45■□□□□ 0.22
USP47-207ENST00000527733 ANKRD36BP1Q96IX9 119 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 FAM81BQ96LP2 452 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 APOL6Q9BWW8 343 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
USP47-207ENST00000527733 EYA4O95677 639 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
USP47-207ENST00000527733 GUF1Q8N442 669 aaKnown RBP16.45■□□□□ 0.22
USP47-207ENST00000527733 BPIFA3Q9BQP9 254 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 CCDC77Q9BR77 488 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 CARD6Q9BX69 1037 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 SLC25A27O95847 323 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 INPP5BP32019 993 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 EPHX2P34913 555 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 RNASE9P60153 205 aaKnown RBP16.45■□□□□ 0.22
USP47-207ENST00000527733 LACTBP83111 547 aaPredicted RBP16.45■□□□□ 0.22
USP47-207ENST00000527733 USTQ9Y2C2 406 aa16.45■□□□□ 0.22
USP47-207ENST00000527733 FOXN1O15353 648 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 ZBED6P86452 979 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 NTRK3Q16288 839 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 SARM1Q6SZW1 724 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 IFT81Q8WYA0 676 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 JPH1Q9HDC5 661 aaPredicted RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 HESX1Q9UBX0 185 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 MTRF1LQ9UGC7 380 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 ZNF233A6NK53 670 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 TLR3O15455 904 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 BACE1P56817 501 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 ETF1P62495 437 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 FAM49AQ9H0Q0 323 aaPredicted RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 RGL1Q9NZL6 768 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 GCNT4Q9P109 453 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 CETPP11597 493 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 HUNKP57058 714 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 TFAMQ00059 246 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 SURF1Q15526 300 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 CACTINQ8WUQ7 758 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 PSMB7Q99436 277 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 PARK7Q99497 189 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 POLR3GO15318 223 aaPredicted RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 KIAA0754O94854 1291 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 KCNB1Q14721 858 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 ZRSR2Q15696 482 aaKnown RBP16.44■□□□□ 0.22
USP47-207ENST00000527733 GRIK5Q16478 980 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 ERO1BQ86YB8 467 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 GPC2Q8N158 579 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 RNF34Q969K3 372 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 CEP63Q96MT8 703 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 TRIM9Q9C026 710 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 IL17RBQ9NRM6 502 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 AMFRQ9UKV5 643 aa16.44■□□□□ 0.22
USP47-207ENST00000527733 ICAM1P05362 532 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 PTPN21Q16825 1174 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 C8orf74Q6P047 294 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 INTS8Q75QN2 995 aaKnown RBP16.43■□□□□ 0.22
USP47-207ENST00000527733 SPATA33Q96N06 139 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 POLD4Q9HCU8 107 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 CCDC66A2RUB6 948 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 UBE2Q2LH0YL09 131 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 LDHAP00338 332 aaKnown RBP16.43■□□□□ 0.22
USP47-207ENST00000527733 RHBDL3P58872 404 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 CCL15Q16663 113 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 MSTO1Q9BUK6 570 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 TRIM49BA6NDI0 452 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 MAPK6Q16659 721 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
USP47-207ENST00000527733 NAALADL2Q58DX5 795 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
USP47-207ENST00000527733 MIS12Q9H081 205 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 PARP2Q9UGN5 583 aa16.43■□□□□ 0.22
USP47-207ENST00000527733 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 POLR2BP30876 1174 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 CFAP221Q4G0U5 840 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 XRRA1Q6P2D8 792 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 CERS5Q8N5B7 392 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 PHLPP2Q6ZVD8 1323 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 RRP9O43818 475 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 NR3C1P04150 777 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 TXNP10599 105 aaKnown RBP16.42■□□□□ 0.22
USP47-207ENST00000527733 CLUL1Q15846 466 aa16.42■□□□□ 0.22
USP47-207ENST00000527733 USP49Q70CQ1 688 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms