RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NOC4LQ9BVI4 516 aaKnown RBP14.29□□□□□ -0.12
SSSCA1-203ENST00000526877 TMEM60Q9H2L4 133 aa14.29□□□□□ -0.12
SSSCA1-203ENST00000526877 FAM13BQ9NYF5 915 aa14.29□□□□□ -0.12
SSSCA1-203ENST00000526877 VWA3AA6NCI4 1184 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 LONP1P36776 959 aaKnown RBP14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 FRMPD4Q14CM0 1322 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 TMEM266Q2M3C6 531 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 PCNX4Q63HM2 1172 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 SLFN12Q8IYM2 578 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 TMEM199Q8N511 208 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 PPP1R13LQ8WUF5 828 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 KAT2BQ92831 832 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 EMID1Q96A84 441 aaPredicted RBP14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 VWCEQ96DN2 955 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 RNPC3Q96LT9 517 aaKnown RBP14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 HIPK3Q9H422 1215 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 MRVI1Q9Y6F6 885 aa14.28□□□□□ -0.12
SSSCA1-203ENST00000526877 TBX3O15119 743 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 SLC37A4O43826 429 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 MMP3P08254 477 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 MYCLP12524 364 aaPredicted RBP14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 CCND2P30279 289 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 TXKP42681 527 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 SP2Q02086 613 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 CEP55Q53EZ4 464 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 PRR16Q569H4 304 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 RESP18Q5W5W9 173 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 ZNF365Q70YC5 407 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 ZFP91Q96JP5 570 aaPredicted RBP14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 MTMR9Q96QG7 549 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 MXRA8Q9BRK3 442 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 RAB34Q9BZG1 259 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 CSRNP2Q9H175 543 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 WNT8AQ9H1J5 351 aa14.27□□□□□ -0.13
SSSCA1-203ENST00000526877 TRIP12Q14669 1992 aaPredicted RBP14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 A0A1B0GVL5 298 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 FAM86B1E9PN63 330 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 FAM86B2P0C5J1 330 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 ACRP10323 421 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 CYP2C9P11712 490 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 LIG1P18858 919 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 TXLNAP40222 546 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 CCL23P55773 120 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 MRPS9P82933 396 aaKnown RBP14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 FAM160A1Q05DH4 1040 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 PTPN11Q06124 597 aaPredicted RBP14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 NIPA1Q7RTP0 329 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 AK8Q96MA6 479 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 FAM20AQ96MK3 541 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 GUCD1Q96NT3 240 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 CTAGE1Q96RT6 745 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 IL23AQ9NPF7 189 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 COL6A3P12111 3177 aa14.26□□□□□ -0.13
SSSCA1-203ENST00000526877 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 MEIS1O00470 390 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 STAM2O75886 525 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 TGFB3P10600 412 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 HOXD8P13378 290 aaPredicted RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 GRIN1Q05586 938 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 LAMC2Q13753 1193 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 IL17AQ16552 155 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 CAVIN1Q6NZI2 390 aaKnown RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 KCNV1Q6PIU1 500 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 DHX37Q8IY37 1157 aaKnown RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 PPTC7Q8NI37 304 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 TTYH1Q9H313 450 aaPredicted RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 GOLPH3LQ9H4A5 285 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 BCAS3Q9H6U6 928 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 KCNMB3Q9NPA1 279 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 DDX19AQ9NUU7 478 aaKnown RBP14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 PCDHA12Q9UN75 941 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 STXBP5LQ9Y2K9 1186 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 SCN5AQ14524 2016 aa14.25□□□□□ -0.13
SSSCA1-203ENST00000526877 IGLV3-22A0A075B6J6 115 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 HAS3O00219 553 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 KINO60870 393 aaKnown RBP14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 PFKFB1P16118 471 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 UBA7P41226 1012 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 TECP42680 631 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 SYKP43405 635 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 NDUFA8P51970 172 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 PDIA5Q14554 519 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 DGKDQ16760 1214 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 FAM47CQ5HY64 1035 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 SPECC1Q5M775 1068 aa14.24□□□□□ -0.13
SSSCA1-203ENST00000526877 NLRX1Q86UT6 975 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms