RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 POTEB3A0JP26 581 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 MED24O75448 989 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 ASGR1P07306 291 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 LONP1P36776 959 aaKnown RBP15.4■□□□□ 0.06
CD44-224ENST00000526669 CCT6AP40227 531 aaKnown RBP15.4■□□□□ 0.06
CD44-224ENST00000526669 AXDND1Q5T1B0 1012 aaPredicted RBP15.4■□□□□ 0.06
CD44-224ENST00000526669 POTEBQ6S5H4 581 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 CXCL17Q6UXB2 119 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 CABP7Q86V35 215 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 SYMPKQ92797 1274 aaKnown RBP15.4■□□□□ 0.06
CD44-224ENST00000526669 GLG1Q92896 1179 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 EPSTI1Q96J88 318 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 LXNQ9BS40 222 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 MMTAG2Q9BU76 263 aaKnown RBP15.4■□□□□ 0.06
CD44-224ENST00000526669 OGDHLQ9ULD0 1010 aa15.4■□□□□ 0.06
CD44-224ENST00000526669 MORC2Q9Y6X9 1032 aaPredicted RBP15.4■□□□□ 0.06
CD44-224ENST00000526669 KBTBD13C9JR72 458 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 ZEB2O60315 1214 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 LGR5O75473 907 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 HOXD8P13378 290 aaPredicted RBP15.39■□□□□ 0.05
CD44-224ENST00000526669 CST5P28325 142 aaPredicted RBP15.39■□□□□ 0.05
CD44-224ENST00000526669 PDIA5Q14554 519 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 ECM1Q16610 540 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 FAM160B1Q5W0V3 765 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 PDXDC2PQ6P474 469 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 TPH2Q8IWU9 490 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 ARRDC4Q8NCT1 418 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 RDM1Q8NG50 284 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 AZI2Q9H6S1 392 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 WRAP73Q9P2S5 460 aaPredicted RBP15.39■□□□□ 0.05
CD44-224ENST00000526669 EMSYQ7Z589 1322 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 IGSF9BQ9UPX0 1349 aa15.39■□□□□ 0.05
CD44-224ENST00000526669 IGKV6D-21A0A0A0MT36 114 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 ZNF862O60290 1169 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 GADD45BO75293 160 aaPredicted RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 PPFIA4O75335 1185 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 P4HBP07237 508 aaKnown RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 SPATA31C1P0DKV0 1188 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 UBA7P41226 1012 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 GJA8P48165 433 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 PSEN2P49810 448 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 STAT5BP51692 787 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 PSMC6P62333 389 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 NKX3-2P78367 333 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 PURAQ00577 322 aaKnown RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 PRKCEQ02156 737 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 KARSQ15046 597 aaKnown RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 HAUS3Q68CZ6 603 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 CCSAPQ6IQ19 270 aaPredicted RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 POTEGQ6S5H5 508 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 SHC4Q6S5L8 630 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 CKAP2LQ8IYA6 745 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 PCSK9Q8NBP7 692 aaKnown RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 RASSF8Q8NHQ8 419 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 DIS3LQ8TF46 1054 aaKnown RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 KAT2BQ92831 832 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 VTI1AQ96AJ9 217 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 AK8Q96MA6 479 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 GBP4Q96PP9 640 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 C16orf70Q9BSU1 422 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 MTG1Q9BT17 334 aaPredicted RBP15.38■□□□□ 0.05
CD44-224ENST00000526669 CRISPLD2Q9H0B8 497 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 DNAH12Q6ZR08 3092 aa15.38■□□□□ 0.05
CD44-224ENST00000526669 TMEM150BA6NC51 233 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 SLITRK3O94933 977 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 ATP4AP20648 1035 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 QARSP47897 775 aaKnown RBP15.37■□□□□ 0.05
CD44-224ENST00000526669 ACLYP53396 1101 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 PSMC5P62195 406 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 GRB10Q13322 594 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 MFSD10Q14728 455 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 PLCB4Q15147 1175 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 CATSPER3Q86XQ3 398 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 FSIP1Q8NA03 581 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 NEK9Q8TD19 979 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
CD44-224ENST00000526669 PANK2Q9BZ23 570 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
CD44-224ENST00000526669 A0A087X0B3 334 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 A0A1W2PQ45 241 aaPredicted RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 A0A1W2PQY0 241 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 GOLGA6L4A6NEF3 574 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 H3BRB1 525 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 DNM1LO00429 736 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 ZBTB39O15060 712 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 PRPF40AO75400 957 aaKnown RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 RPA1P27694 616 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 TXLNAP40222 546 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 RESP18Q5W5W9 173 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 PLA2G4FQ68DD2 849 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms