RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 LTBRP36941 435 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 KCNJ6P48051 423 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 SV2CQ496J9 727 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 TMC5Q6UXY8 1006 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 BHLHA9Q7RTU4 235 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 ZNF227Q86WZ6 799 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 KREMEN2Q8NCW0 462 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 CLDND1Q9NY35 253 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 MYOTQ9UBF9 498 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 WIZO95785 1651 aa6.66□□□□□ -1.34
C11orf54-203ENST00000526335 SMARCA2P51531 1590 aa6.65□□□□□ -1.34
C11orf54-203ENST00000526335 NCLP19338 710 aaKnown RBP6.65□□□□□ -1.35
C11orf54-203ENST00000526335 TESK1Q15569 626 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 PRSS53Q2L4Q9 553 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 ZNF662Q6ZS27 426 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 GLCCI1Q86VQ1 547 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 LDLRAD3Q86YD5 345 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.65□□□□□ -1.35
C11orf54-203ENST00000526335 EXTL1Q92935 676 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 CCDC140Q96MF4 163 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 AGAP2Q99490 1192 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 OSBPL2Q9H1P3 480 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 MEGF9Q9H1U4 602 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 EPB41L1Q9H4G0 881 aa6.65□□□□□ -1.35
C11orf54-203ENST00000526335 NOP58Q9Y2X3 529 aaKnown RBP6.65□□□□□ -1.35
C11orf54-203ENST00000526335 A0A0U1RQG5 324 aaPredicted RBP6.64□□□□□ -1.35
C11orf54-203ENST00000526335 MAFKO60675 156 aa6.64□□□□□ -1.35
C11orf54-203ENST00000526335 SSBP05455 408 aaKnown RBP eCLIP6.64□□□□□ -1.35
C11orf54-203ENST00000526335 LCP1P13796 627 aa6.64□□□□□ -1.35
C11orf54-203ENST00000526335 RGS19P49795 217 aa6.64□□□□□ -1.35
C11orf54-203ENST00000526335 BMS1Q14692 1282 aaKnown RBP6.64□□□□□ -1.35
C11orf54-203ENST00000526335 PHOSPHO1Q8TCT1 267 aa6.64□□□□□ -1.35
C11orf54-203ENST00000526335 PTMSP20962 102 aa6.63□□□□□ -1.35
C11orf54-203ENST00000526335 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
C11orf54-203ENST00000526335 SF1Q15637 639 aaKnown RBP6.63□□□□□ -1.35
C11orf54-203ENST00000526335 C6orf15Q6UXA7 325 aaPredicted RBP6.63□□□□□ -1.35
C11orf54-203ENST00000526335 SMOC1Q9H4F8 434 aa6.63□□□□□ -1.35
C11orf54-203ENST00000526335 WASF3Q9UPY6 502 aa6.63□□□□□ -1.35
C11orf54-203ENST00000526335 RRBP1Q9P2E9 1410 aaKnown RBP6.63□□□□□ -1.35
C11orf54-203ENST00000526335 ATAD2BQ9ULI0 1458 aa6.63□□□□□ -1.35
C11orf54-203ENST00000526335 TOP2AP11388 1531 aaKnown RBP6.63□□□□□ -1.35
C11orf54-203ENST00000526335 ANP32CO43423 234 aa6.62□□□□□ -1.35
C11orf54-203ENST00000526335 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
C11orf54-203ENST00000526335 CKAP2LQ8IYA6 745 aa6.62□□□□□ -1.35
C11orf54-203ENST00000526335 ADAM29Q9UKF5 820 aa6.62□□□□□ -1.35
C11orf54-203ENST00000526335 MRVI1Q9Y6F6 885 aa6.62□□□□□ -1.35
C11orf54-203ENST00000526335 LAMC3Q9Y6N6 1575 aa6.62□□□□□ -1.35
C11orf54-203ENST00000526335 RIMBP3CA6NJZ7 1639 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 RIMBP3BA6NNM3 1639 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 RIMBP3Q9UFD9 1639 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 KRIT1O00522 736 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 SUSD5O60279 629 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 GFRA1P56159 465 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 CCDC142Q17RM4 750 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
C11orf54-203ENST00000526335 VASNQ6EMK4 673 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 SDE2Q6IQ49 451 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 FAM178BQ8IXR5 827 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 TMEM145Q8NBT3 493 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 GNRHR2Q96P88 292 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 ACTR10Q9NZ32 417 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 HSPBP1Q9NZL4 362 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 RBPJLQ9UBG7 517 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 ASH2LQ9UBL3 628 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 TBX22Q9Y458 520 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 DMRT1Q9Y5R6 373 aa6.61□□□□□ -1.35
C11orf54-203ENST00000526335 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
C11orf54-203ENST00000526335 FOXS1O43638 330 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 COL6A1P12109 1028 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 SETQ01105 290 aaPredicted RBP6.6□□□□□ -1.35
C11orf54-203ENST00000526335 CYP4F22Q6NT55 531 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 MRGPRGQ86SM5 289 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 TRIM48Q8IWZ4 208 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 NUDT10Q8NFP7 164 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 NUDT11Q96G61 164 aa6.6□□□□□ -1.35
C11orf54-203ENST00000526335 B2RBV5 119 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 SMAD7O15105 426 aaKnown RBP6.59□□□□□ -1.35
C11orf54-203ENST00000526335 CNOT4O95628 575 aaKnown RBP6.59□□□□□ -1.35
C11orf54-203ENST00000526335 ADH4P08319 380 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 ETFBP38117 255 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 SMAD2Q15796 467 aaKnown RBP6.59□□□□□ -1.35
C11orf54-203ENST00000526335 DENND5AQ6IQ26 1287 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 DTX3Q8N9I9 347 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 TTLL11Q8NHH1 800 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 SEC61A2Q9H9S3 476 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
C11orf54-203ENST00000526335 HMGXB3Q12766 1538 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 RUSC2Q8N2Y8 1516 aa6.59□□□□□ -1.35
C11orf54-203ENST00000526335 SBNO2Q9Y2G9 1366 aa6.59□□□□□ -1.36
C11orf54-203ENST00000526335 PLSCR1O15162 318 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 KLHL18O94889 574 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 FBXO21O94952 628 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 KRTAP10-11P60412 298 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 DDX10Q13206 875 aaKnown RBP6.58□□□□□ -1.36
C11orf54-203ENST00000526335 TNNI3KQ59H18 835 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 PHF19Q5T6S3 580 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 TCTN3Q6NUS6 607 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 Q6ZUG5 572 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 PROSER1Q86XN7 944 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms