RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 HIRIP3Q9BW71 556 aaPredicted RBP4□□□□□ -1.77
ECHDC1-218ENST00000525745 SPATA9Q9BWV2 254 aa4□□□□□ -1.77
ECHDC1-218ENST00000525745 SCAND2PQ9GZW5 306 aaPredicted RBP4□□□□□ -1.77
ECHDC1-218ENST00000525745 RIC8BQ9NVN3 520 aa4□□□□□ -1.77
ECHDC1-218ENST00000525745 PTPN22Q9Y2R2 807 aa4□□□□□ -1.77
ECHDC1-218ENST00000525745 AQP7O14520 342 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 ZNF623O75123 536 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 IL18BPO95998 194 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 ZNF888P0CJ79 500 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 RBL2Q08999 1139 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 PAK1Q13153 545 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 MTERF2Q49AM1 385 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 SPDYAQ5MJ70 313 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 BTBD8Q5XKL5 378 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 EP400NLQ6ZTU2 488 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 Q8TCH9 128 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 SH3RF2Q8TEC5 729 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 ARMC5Q96C12 935 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 AJUBAQ96IF1 538 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 IPO9Q96P70 1041 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 PDGFDQ9GZP0 370 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 VPS11Q9H270 941 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 SEC61A2Q9H9S3 476 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 CATSPERZQ9NTU4 200 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 ARHGAP28Q9P2N2 729 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 PFDN2Q9UHV9 154 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 PCDHA8Q9Y5H6 950 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 SLC4A7Q9Y6M7 1214 aa3.99□□□□□ -1.77
ECHDC1-218ENST00000525745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 TCRBV5S4A2TA0A5A2 114 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 ESYT3A0FGR9 886 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 PDPK1O15530 556 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 AMHP03971 560 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 PTPN1P18031 435 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 KRT15P19012 456 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 RRADP55042 308 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 GUCY1A3Q02108 690 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 DBPQ10586 325 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 USP10Q14694 798 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 HS1BP3Q53T59 392 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 SOGA3Q5TF21 947 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 TCTN3Q6NUS6 607 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 ARHGAP36Q6ZRI8 547 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 MAMDC2Q7Z304 686 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 REXO1L1PQ8IX06 675 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 ZFPM1Q8IX07 1006 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 NLGN4XQ8N0W4 816 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 Q8N1X5 172 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 ZNF747Q9BV97 191 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 CARD11Q9BXL7 1154 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 KATNBL1Q9H079 304 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 SRPK3Q9UPE1 567 aa3.98□□□□□ -1.77
ECHDC1-218ENST00000525745 TRBV23-1A0A0A0MS06 115 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 FAM90A27PA6NNH2 459 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 FOXS1O43638 330 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 SRGAP2CP0DJJ0 459 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 PYGMP11217 842 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 PDE6AP16499 860 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 POLD1P28340 1107 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 ST5P78524 1137 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 SSRP1Q08945 709 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 R3HDM1Q15032 1099 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 GPR19Q15760 415 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 WDR72Q3MJ13 1102 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 FAM209AQ5JX71 171 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 CRIP3Q6Q6R5 217 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 DPP8Q6V1X1 898 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 USP51Q70EK9 711 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 TAX1BP1Q86VP1 789 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 OSTM1Q86WC4 334 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 PTRH1Q86Y79 214 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 SCUBE1Q8IWY4 988 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 PMFBP1Q8TBY8 1022 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 PTPRN2Q92932 1015 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 FBXW5Q969U6 566 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 ZNF669Q96BR6 464 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 NEIL1Q96FI4 390 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 SORCS2Q96PQ0 1159 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 ADOQ96SZ5 270 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 SEMA4AQ9H3S1 761 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 ZFR2Q9UPR6 939 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 ATP23Q9Y6H3 246 aa3.97□□□□□ -1.77
ECHDC1-218ENST00000525745 PRAMEF25A6NGN4 478 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 MAN2B1O00754 1011 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 KCNK3O14649 394 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 ADCY3O60266 1144 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 FZD7O75084 574 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 ADCY8P40145 1251 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 HMGA2P52926 109 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 RAC3P60763 192 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 SUMO1P63165 101 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 CRY1Q16526 586 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 NBPF6Q5VWK0 638 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 FOXB2Q5VYV0 432 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 PCDH19Q8TAB3 1148 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 NBPF4Q96M43 638 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 SIRPGQ9P1W8 387 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 CBLCQ9ULV8 474 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 MSRB2Q9Y3D2 182 aa3.96□□□□□ -1.78
ECHDC1-218ENST00000525745 CYR61O00622 381 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms