RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 TRIM43BA6NCK2 446 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 PRR33A8MZF0 331 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 GOLIM4O00461 696 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 EREGO14944 169 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 NEMFO60524 1076 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 CTNND1O60716 968 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 EIF3JO75822 258 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 GLRX3O76003 335 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 GLB1P16278 677 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 EPHA1P21709 976 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 CYP2C19P33261 490 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 SERPINB4P48594 390 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 SARNPP82979 210 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 UBE4AQ14139 1066 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ZRSR1Q15695 479 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 RAB30Q15771 203 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ATP2B3Q16720 1220 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ZSCAN23Q3MJ62 389 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 CAVIN4Q5BKX8 364 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 TREML2Q5T2D2 321 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 GJC2Q5T442 439 aaPredicted RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 APOBEC3HQ6NTF7 200 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 TXNDC11Q6PKC3 985 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 HHIPL2Q6UWX4 724 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 KSR2Q6VAB6 950 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 LDHAL6AQ6ZMR3 332 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ACAD11Q709F0 780 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 BSNDQ8WZ55 320 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 HERVK_113Q902F9 699 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 TRIM43Q96BQ3 446 aaPredicted RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 OSMRQ99650 979 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 APBA2Q99767 749 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 NOL10Q9BSC4 688 aaKnown RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 SSBP4Q9BWG4 385 aaPredicted RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 PLA2G12BQ9BX93 195 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ASCC2Q9H1I8 757 aaPredicted RBP5.77□□□□□ -1.49
CD44-218ENST00000525469 SLC28A3Q9HAS3 691 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.77□□□□□ -1.49
CD44-218ENST00000525469 CTNNA3Q9UI47 895 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 MYH2Q9UKX2 1941 aa5.77□□□□□ -1.49
CD44-218ENST00000525469 ELP1O95163 1332 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 LOC285556D6RIA3 1793 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 PI4KAP2A4QPH2 592 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 PI4K2BG5E9Z4 385 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 ELL2O00472 640 aaPredicted RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 PES1O00541 588 aaKnown RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 ERC2O15083 957 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 DHX16O60231 1041 aaKnown RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 IGKV5-2P06315 115 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CSF1RP07333 972 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CLTBP09497 229 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CDC25BP30305 580 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 TMPOP42166 694 aaKnown RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 NOP2P46087 812 aaKnown RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 TUBB4BP68371 445 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 TLE2Q04725 743 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 GCKRQ14397 625 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CCL14Q16627 93 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 DUOXA2Q1HG44 320 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CCDC57Q2TAC2 916 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CWF19L2Q2TBE0 894 aaKnown RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 ZMYM1Q5SVZ6 1142 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 WDR78Q5VTH9 848 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 CCDC30Q5VVM6 783 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 Q6ZS46 218 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 PLEKHH3Q7Z736 793 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 GAS2L3Q86XJ1 694 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 PI4KAP1Q8N8J0 262 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 EDC3Q96F86 508 aaKnown RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 FAM84BQ96KN1 310 aaPredicted RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 ZKSCAN3Q9BRR0 538 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 TSPY26PQ9H489 355 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 TMEM39AQ9NV64 488 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 USP40Q9NVE5 1235 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 PSD3Q9NYI0 1048 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 MORF4L1Q9UBU8 362 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 RSPH14Q9UHP6 348 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 FOXD3Q9UJU5 478 aaPredicted RBP5.76□□□□□ -1.49
CD44-218ENST00000525469 COG5Q9UP83 839 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 SUGT1Q9Y2Z0 365 aa5.76□□□□□ -1.49
CD44-218ENST00000525469 ZDBF2Q9HCK1 2354 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 UTYO14607 1347 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 CACNA1FO60840 1977 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 SCO2A0A1W2PP80 73 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 TMCO5BA8MYB1 307 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 GSC2O15499 205 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 BAG4O95429 457 aaKnown RBP5.75□□□□□ -1.49
CD44-218ENST00000525469 CT47B1P0C2W7 299 aaPredicted RBP5.75□□□□□ -1.49
CD44-218ENST00000525469 ALADP13716 330 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 ADCYAP1R1P41586 468 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 MCM2P49736 904 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 EPHB4P54760 987 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 HMGCS2P54868 508 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 RAD51AP2Q09MP3 1159 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 C19orf57Q0VDD7 668 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 SPP2Q13103 211 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 IKBKEQ14164 716 aa5.75□□□□□ -1.49
CD44-218ENST00000525469 TTC31Q49AM3 519 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms