RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 LIN7AO14910 233 aaPredicted RBP12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 ALADP13716 330 aa12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 RAD23BP54727 409 aa12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 MIIPQ5JXC2 388 aa12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 FAM81AQ8TBF8 368 aa12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 INPP4AQ96PE3 977 aaPredicted RBP12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.28□□□□□ -0.44
CLNS1A-204ENST00000525428 APBA3O96018 575 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 CUL3Q13618 768 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 IFI16Q16666 785 aaKnown RBP12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 FAM47EQ6ZV65 393 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 LMNTD2Q8IXW0 634 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 FANCBQ8NB91 859 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 PACSIN1Q9BY11 444 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 PCMTD2Q9NV79 361 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 TACC3Q9Y6A5 838 aa12.27□□□□□ -0.44
CLNS1A-204ENST00000525428 PAPPAQ13219 1627 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 ECEL1O95672 775 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 ITGA4P13612 1032 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 SESN3P58005 492 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 COPS2P61201 443 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 ITIH4Q14624 930 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 MTHFD1LQ6UB35 978 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 TMC3Q7Z5M5 1100 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 STAG2Q8N3U4 1231 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 TANGO6Q9C0B7 1094 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 UBE2OQ9C0C9 1292 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 CNOT10Q9H9A5 744 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 FGFR1OP2Q9NVK5 253 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 F8VZ95 297 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 SNAP23O00161 211 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 ASAP2O43150 1006 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 TTI1O43156 1089 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 CUL1Q13616 776 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 KIAA0753Q2KHM9 967 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 ADAT2Q7Z6V5 191 aaKnown RBP12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 SYCP3Q8IZU3 236 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 TBC1D5Q92609 795 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 NAPBQ9H115 298 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 GREM2Q9H772 168 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 C4BP0C0L5 1744 aa12.27□□□□□ -0.45
CLNS1A-204ENST00000525428 XBP1P17861 261 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 LIFRP42702 1097 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 TBC1D9BQ66K14 1250 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 AZI2Q9H6S1 392 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 KRIT1O00522 736 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 FCER1AP12319 257 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 ALDH3A1P30838 453 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 SOGA3Q5TF21 947 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 ZBTB38Q8NAP3 1195 aaPredicted RBP12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 PHC3Q8NDX5 983 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 FBF1Q8TES7 1133 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 ATXN2LQ8WWM7 1075 aaKnown RBP12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 WDR35Q9P2L0 1181 aa12.26□□□□□ -0.45
CLNS1A-204ENST00000525428 CDK17Q00537 523 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 MTMR3Q13615 1198 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 RPS6KA1Q15418 735 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 MFSD6Q6ZSS7 791 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 KSR1Q8IVT5 923 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 HELBQ8NG08 1087 aaPredicted RBP12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 UCMAQ8WVF2 138 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 TRIM51Q9BSJ1 452 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 RTCBQ9Y3I0 505 aaKnown RBP12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 ATP2C1P98194 919 aaPredicted RBP12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 STK4Q13043 487 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 OTUD6AQ7L8S5 288 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 TEX9Q8N6V9 391 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 ADAMTS1Q9UHI8 967 aa12.25□□□□□ -0.45
CLNS1A-204ENST00000525428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 ADAMTS3O15072 1205 aa12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 RGS16O15492 202 aaPredicted RBP12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 SNX3O60493 162 aa12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 IGHMBP2P38935 993 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 PDE4DQ08499 809 aa12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 TXNRD1Q16881 649 aa12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 UBAP2Q5T6F2 1119 aaKnown RBP12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 MEI1Q5TIA1 1274 aa12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 SLC51AQ86UW1 340 aa12.24□□□□□ -0.45
CLNS1A-204ENST00000525428 FITM2Q8N6M3 262 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms