RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 CABP7Q86V35 215 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 LILRA2Q8N149 483 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 ABHD4Q8TB40 342 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 PANK1Q8TE04 598 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 SLC5A5Q92911 643 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 YIPF4Q9BSR8 244 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 ASH2LQ9UBL3 628 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 PCDHB4Q9Y5E5 795 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 B3GALT1Q9Y5Z6 326 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 ATP23Q9Y6H3 246 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 TCRBV5S2A0A599 114 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 F8W031 263 aaPredicted RBP6.3□□□□□ -1.4
USP47-206ENST00000525367 ACOT7O00154 380 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 HGSO14964 777 aaPredicted RBP6.3□□□□□ -1.4
USP47-206ENST00000525367 MYL1P05976 194 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 TMEM253P0C7T8 217 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 RAC2P15153 192 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 ATF3P18847 181 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
USP47-206ENST00000525367 ERVK-21P61565 698 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 JAG1P78504 1218 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 SAFB2Q14151 953 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP47-206ENST00000525367 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 BRD3Q15059 726 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 DDB1Q16531 1140 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 MAP9Q49MG5 647 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 ADGRF1Q5T601 910 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 PPP4R4Q6NUP7 873 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 RPTNQ6XPR3 784 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 APBB1IPQ7Z5R6 666 aaPredicted RBP6.3□□□□□ -1.4
USP47-206ENST00000525367 MILR1Q7Z6M3 343 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 DCP2Q8IU60 420 aaKnown RBP6.3□□□□□ -1.4
USP47-206ENST00000525367 CBARPQ8N350 705 aaPredicted RBP6.3□□□□□ -1.4
USP47-206ENST00000525367 EFHBQ8N7U6 833 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 NETO2Q8NC67 525 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 DLG3Q92796 817 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 CCDC120Q96HB5 630 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 PCIF1Q9H4Z3 704 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 ZMAT4Q9H898 229 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 RIC8BQ9NVN3 520 aa6.3□□□□□ -1.4
USP47-206ENST00000525367 TNKSO95271 1327 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 SRGAP3O43295 1099 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 CLASP2O75122 1294 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 MT-CO1P00395 513 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 C4BPAP04003 597 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 PTPN1P18031 435 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 THBS2P35442 1172 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 SMAD3P84022 425 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 RALBP1Q15311 655 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 LRRC41Q15345 812 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 SMAD2Q15796 467 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 CATSPEREQ5SY80 951 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 BTBD8Q5XKL5 378 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 C11orf74Q86VG3 221 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 SEC14L1Q92503 715 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 PUS7LQ9H0K6 701 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 SMOC1Q9H4F8 434 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 YBX2Q9Y2T7 364 aaKnown RBP6.29□□□□□ -1.4
USP47-206ENST00000525367 SPO11Q9Y5K1 396 aa6.29□□□□□ -1.4
USP47-206ENST00000525367 PRAMEF25A6NGN4 478 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 BUB1BO60566 1050 aaPredicted RBP6.28□□□□□ -1.4
USP47-206ENST00000525367 HIP1RO75146 1068 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 SCGB1D2O95969 90 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 CYBBP04839 570 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 ARL4AP40617 200 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 EPHA5P54756 1037 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 ERVFRD-1P60508 538 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 OCRLQ01968 901 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 MCL1Q07820 350 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 TERF2Q15554 542 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 ZNF174Q15697 407 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 PLEKHN1Q494U1 663 aaPredicted RBP6.28□□□□□ -1.4
USP47-206ENST00000525367 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 EP400NLQ6ZTU2 488 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 MYO1HQ8N1T3 1032 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 SAMD3Q8N6K7 520 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 FLAD1Q8NFF5 587 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 INTS4Q96HW7 963 aaKnown RBP6.28□□□□□ -1.4
USP47-206ENST00000525367 KIRREL1Q96J84 757 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 AP5M1Q9H0R1 490 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 TOPORSQ9NS56 1045 aaPredicted RBP6.28□□□□□ -1.4
USP47-206ENST00000525367 C14orf119Q9NWQ9 140 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
USP47-206ENST00000525367 E2F8A0AVK6 867 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 SHTN1A0MZ66 631 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 ULK1O75385 1050 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 MMEP08473 750 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 NEK2P51955 445 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 PRR5P85299 388 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 RAB3GAP1Q15042 981 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 CHRNA2Q15822 529 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 LONRF3Q496Y0 759 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 C4orf46Q504U0 113 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 PAQR3Q6TCH7 311 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 NLGN4XQ8N0W4 816 aa6.27□□□□□ -1.41
USP47-206ENST00000525367 RTF1Q92541 710 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms