RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 B3GNT9Q6UX72 402 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 SERINC5Q86VE9 423 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 FAM20AQ96MK3 541 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 FOXP1Q9H334 677 aaPredicted RBP14.65□□□□□ -0.06
CTSB-209ENST00000525315 KCNMB3Q9NPA1 279 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 SETD4Q9NVD3 440 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 PCDHA10Q9Y5I2 948 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 TANC1Q9C0D5 1861 aa14.65□□□□□ -0.06
CTSB-209ENST00000525315 TBX3O15119 743 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 TREHO43280 583 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 CCNT1O60563 726 aaKnown RBP14.64□□□□□ -0.07
CTSB-209ENST00000525315 IQCF3P0C7M6 154 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 CUL4AQ13619 759 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 PLCB4Q15147 1175 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 SHHQ15465 462 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 LRCH2Q5VUJ6 765 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 SWSAP1Q6NVH7 229 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 CCDC155Q8N6L0 562 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 RETREG2Q8NC44 543 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 HAS1Q92839 578 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 TNPO1Q92973 898 aaKnown RBP14.64□□□□□ -0.07
CTSB-209ENST00000525315 ATP6V0A1Q93050 837 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 GJA10Q969M2 543 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 TEKT3Q9BXF9 490 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 IL23AQ9NPF7 189 aa14.64□□□□□ -0.07
CTSB-209ENST00000525315 MAFBQ9Y5Q3 323 aaPredicted RBP14.64□□□□□ -0.07
CTSB-209ENST00000525315 RRN3P2A6NIE6 340 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 GAS7O60861 476 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 PSAPP07602 524 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 CKBP12277 381 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 ATP4AP20648 1035 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 MARK3P27448 753 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 SFNP31947 248 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 RFC2P35250 354 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 LRIT3Q3SXY7 679 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 TMEM240Q5SV17 173 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 C9orf50Q5SZB4 431 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 MARCH8Q5T0T0 291 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 FAM160B1Q5W0V3 765 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 CCDC60Q8IWA6 550 aaPredicted RBP14.63□□□□□ -0.07
CTSB-209ENST00000525315 RPUSD2Q8IZ73 545 aaKnown RBP14.63□□□□□ -0.07
CTSB-209ENST00000525315 RDM1Q8NG50 284 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 LMBR1Q8WVP7 490 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 WNT8BQ93098 351 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 SCLYQ96I15 445 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 UNC45AQ9H3U1 944 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 ZNF302Q9NR11 478 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 KIF3AQ9Y496 699 aa14.63□□□□□ -0.07
CTSB-209ENST00000525315 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.63□□□□□ -0.07
CTSB-209ENST00000525315 LOXHD1Q8IVV2 1947 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 LAMA2P24043 3122 aaKnown RBP14.62□□□□□ -0.07
CTSB-209ENST00000525315 POTEB3A0JP26 581 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 MBLAC1A4D2B0 266 aaPredicted RBP14.62□□□□□ -0.07
CTSB-209ENST00000525315 WDR64B1ANS9 1081 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 BACH1O14867 736 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 INSRRP14616 1297 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 SELPP16109 830 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 U2AF2P26368 475 aaKnown RBP eCLIP14.62□□□□□ -0.07
CTSB-209ENST00000525315 GJB2P29033 226 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 JAK3P52333 1124 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 PPFIA1Q13136 1202 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 GPNMBQ14956 572 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 GRIK4Q16099 956 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 PDXDC2PQ6P474 469 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 TRAF7Q6Q0C0 670 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 POTEBQ6S5H4 581 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 RPAINQ86UA6 219 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.62□□□□□ -0.077e-6■■■■□ 21.2
CTSB-209ENST00000525315 DISC1Q9NRI5 854 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 TCEAL9Q9UHQ7 104 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 LAMA3Q16787 3333 aa14.62□□□□□ -0.07
CTSB-209ENST00000525315 WNT7AO00755 349 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 HBP1O60381 514 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 PARNO95453 639 aaKnown RBP14.61□□□□□ -0.07
CTSB-209ENST00000525315 FGBP02675 491 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 ACRP10323 421 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 FXR1P51114 621 aaKnown RBP eCLIP14.61□□□□□ -0.07
CTSB-209ENST00000525315 PPP2R5CQ13362 524 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 ZNF618Q5T7W0 954 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 RASIP1Q5U651 963 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 ZNF365Q70YC5 407 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 ATP8B4Q8TF62 1192 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 GABBR1Q9UBS5 961 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 SMC3Q9UQE7 1217 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 SAMM50Q9Y512 469 aa14.61□□□□□ -0.07
CTSB-209ENST00000525315 ZBTB42B2RXF5 422 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 KIF28PB7ZC32 967 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 CAND2O75155 1236 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 BAG4O95429 457 aaKnown RBP14.6□□□□□ -0.07
CTSB-209ENST00000525315 PFKMP08237 780 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 ZNF484Q5JVG2 852 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 FAM26DQ5JW98 314 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 PSRC1Q6PGN9 363 aaPredicted RBP14.6□□□□□ -0.07
CTSB-209ENST00000525315 LRRC8DQ7L1W4 858 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 MIER3Q7Z3K6 550 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 POTEDQ86YR6 584 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 SLFN12Q8IYM2 578 aa14.6□□□□□ -0.07
CTSB-209ENST00000525315 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms