RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 NOLC1Q14978 699 aaKnown RBP eCLIP18.56■□□□□ 0.56
BEST1-203ENST00000524877 TTBK2Q6IQ55 1244 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 PADI6Q6TGC4 694 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 GLIS2Q9BZE0 524 aaPredicted RBP18.56■□□□□ 0.56
BEST1-203ENST00000524877 SPATS2LQ9NUQ6 558 aaKnown RBP18.56■□□□□ 0.56
BEST1-203ENST00000524877 CAMTA1Q9Y6Y1 1673 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.56■□□□□ 0.56
BEST1-203ENST00000524877 SMARCAD1Q9H4L7 1026 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 FMN2Q9NZ56 1722 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 RASA1P20936 1047 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 PCDHB6Q9Y5E3 794 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 PCDHA10Q9Y5I2 948 aa18.56■□□□□ 0.56
BEST1-203ENST00000524877 COL14A1Q05707 1796 aaKnown RBP18.55■□□□□ 0.56
BEST1-203ENST00000524877 CCDC160A6NGH7 325 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 HSF2BPO75031 334 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 PPFIA1Q13136 1202 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 FAM83AQ86UY5 434 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 TMTC1Q8IUR5 882 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 CAPZA3Q96KX2 299 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 ACTN1P12814 892 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 EXOC3L4Q17RC7 722 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 BEST2Q8NFU1 509 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 MAIP1Q8WWC4 291 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 CBX8Q9HC52 389 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 GGPS1O95749 300 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 PIGOQ8TEQ8 1089 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 MROH8Q9H579 483 aa18.55■□□□□ 0.56
BEST1-203ENST00000524877 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 AFPP02771 609 aaKnown RBP18.54■□□□□ 0.56
BEST1-203ENST00000524877 DDIT3P35638 169 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 STAT5BP51692 787 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 BACE1P56817 501 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 KYAT1Q16773 422 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 EMILIN3Q9NT22 766 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 THAP12O43422 761 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 ZNF568Q3ZCX4 644 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 POLR3FQ9H1D9 316 aaPredicted RBP18.54■□□□□ 0.56
BEST1-203ENST00000524877 LRRC4BQ9NT99 713 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 HOXA10P31260 410 aaPredicted RBP18.54■□□□□ 0.56
BEST1-203ENST00000524877 LRRC41Q15345 812 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 NBPF12Q5TAG4 269 aaPredicted RBP18.54■□□□□ 0.56
BEST1-203ENST00000524877 ATG4CQ96DT6 458 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 STMN4Q9H169 189 aaPredicted RBP18.54■□□□□ 0.56
BEST1-203ENST00000524877 RAB20Q9NX57 234 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 POLIQ9UNA4 740 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 ZKSCAN5Q9Y2L8 839 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 TTLL3Q9Y4R7 772 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 CLIC2O15247 247 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 PPP1R2P3Q6NXS1 205 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
BEST1-203ENST00000524877 CLDN3O15551 220 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 MAGEA1P43355 309 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 SECISBP2LQ93073 1101 aaKnown RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 KIAA1586Q9HCI6 787 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 HS1BP3Q53T59 392 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 ZNF658Q5TYW1 1059 aaPredicted RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 GSDMBQ8TAX9 411 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 ADM5C9JUS6 153 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 STK25O00506 426 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 NSFP46459 744 aaKnown RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 TSPY1Q01534 308 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 DGKDQ16760 1214 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 ZNF365Q70YC5 407 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 P2RX5Q93086 422 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 AIFM3Q96NN9 605 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 ARFGAP3Q9NP61 516 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 NXF1Q9UBU9 619 aaKnown RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 IER5Q5VY09 327 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 CYFIP1Q7L576 1253 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 SGMS1Q86VZ5 419 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 THNSL1Q8IYQ7 743 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 CDCA5Q96FF9 252 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 PIDD1Q9HB75 910 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 RPUSD2Q8IZ73 545 aaKnown RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 GPR161Q8N6U8 529 aaKnown RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 CCDC63Q8NA47 563 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 ARRDC4Q8NCT1 418 aa18.53■□□□□ 0.56
BEST1-203ENST00000524877 MKRN1Q9UHC7 482 aaKnown RBP18.53■□□□□ 0.56
BEST1-203ENST00000524877 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.56
BEST1-203ENST00000524877 TYW1BQ6NUM6 668 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 KIF9Q9HAQ2 790 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 LRRC4Q9HBW1 653 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 SLFN14P0C7P3 912 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 SPATA1Q5VX52 437 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 SIX6OS1Q8N1H7 587 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 SCFD2Q8WU76 684 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 CNOT6LQ96LI5 555 aaKnown RBP18.52■□□□□ 0.56
BEST1-203ENST00000524877 EFCC1Q9HA90 598 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 IFT122Q9HBG6 1241 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 TOB2Q14106 344 aaPredicted RBP18.52■□□□□ 0.56
BEST1-203ENST00000524877 CCDC6Q16204 474 aa18.52■□□□□ 0.56
BEST1-203ENST00000524877 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.55
BEST1-203ENST00000524877 DPYSL4O14531 572 aa18.52■□□□□ 0.55
BEST1-203ENST00000524877 CEP55Q53EZ4 464 aa18.52■□□□□ 0.55
BEST1-203ENST00000524877 XRRA1Q6P2D8 792 aa18.52■□□□□ 0.55
BEST1-203ENST00000524877 CCDC121Q6ZUS5 278 aa18.52■□□□□ 0.55
BEST1-203ENST00000524877 GLT1D1Q96MS3 346 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms