RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 NEUROG2Q9H2A3 272 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
PTPRK-217ENST00000524534 NARFQ9UHQ1 456 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 NENFQ9UMX5 172 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 COL24A1Q17RW2 1714 aa12.6□□□□□ -0.39
PTPRK-217ENST00000524534 PLIN4Q96Q06 1357 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 PGRMC1O00264 195 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 CETN3O15182 167 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 SART1O43290 800 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 SSBP05455 408 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 PLA2G4BP0C869 781 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 ACTN1P12814 892 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 HPDP32754 393 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 IFT88Q13099 833 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 UBE2SQ16763 222 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 OR2W6PQ8NHA6 318 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 GJA10Q969M2 543 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 MYCBPQ99417 103 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■□□□□ 8.7
PTPRK-217ENST00000524534 MTMR4Q9NYA4 1195 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 NAGPAQ9UK23 515 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 PCDHA12Q9UN75 941 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 ZNF831Q5JPB2 1677 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 NPHP3-ACAD11A0A0J9YXS1 232 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 GMNCA6NCL1 334 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 CCDC188H7C350 402 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 UCHL3P15374 230 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 GCFC2P16383 781 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 CYP11B2P19099 503 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 CTNNA1P35221 906 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 PRKCIP41743 596 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 EPS15P42566 896 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 SMTNP53814 917 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 RHBDL3P58872 404 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 RNF187Q5TA31 235 aaPredicted RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 RUFY4Q6ZNE9 571 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 ZNF804AQ7Z570 1209 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 SLFN11Q7Z7L1 901 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 GPBP1Q86WP2 473 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 RASGEF1CQ8N431 466 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 METTL13Q8N6R0 699 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 TPCN2Q8NHX9 752 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 GOLPH3Q9H4A6 298 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 PPANQ9NQ55 473 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 SRP68Q9UHB9 627 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 HDAC9Q9UKV0 1011 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 KIAA1024Q9UPX6 916 aa12.59□□□□□ -0.39
PTPRK-217ENST00000524534 NOC2LQ9Y3T9 749 aaKnown RBP12.59□□□□□ -0.39
PTPRK-217ENST00000524534 NHSQ6T4R5 1651 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 SLC26A4O43511 780 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 TRAPPC3O43617 180 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 RASSF9O75901 435 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 PLCG2P16885 1265 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 SLC9A1P19634 815 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 ANXA13P27216 316 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 C15orf52Q6ZUT6 534 aaKnown RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 FRMD5Q7Z6J6 570 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 SEC14L1Q92503 715 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 STXBP5LQ9Y2K9 1186 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 PAEPP09466 180 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 SETQ01105 290 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 CACNB1Q02641 598 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 CCDC13Q8IYE1 715 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 DDX47Q9H0S4 455 aaKnown RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 SUCLA2Q9P2R7 463 aaPredicted RBP12.58□□□□□ -0.4
PTPRK-217ENST00000524534 FBXL5Q9UKA1 691 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 TRAF3IP3Q9Y228 551 aa12.58□□□□□ -0.4
PTPRK-217ENST00000524534 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 A0A0A6YYK5 440 aaPredicted RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 C5orf60A6NFR6 353 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 MARCH6O60337 910 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 NR2F2P24468 414 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 PON1P27169 355 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 FLT3P36888 993 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 KCNQ4P56696 695 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 ARSHQ5FYA8 562 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 LRRC47Q8N1G4 583 aaKnown RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 CUL5Q93034 780 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 CENPHQ9H3R5 247 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 SLITRK6Q9H5Y7 841 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 GPCPD1Q9NPB8 672 aa12.57□□□□□ -0.4
PTPRK-217ENST00000524534 DDX20Q9UHI6 824 aaKnown RBP12.57□□□□□ -0.4
PTPRK-217ENST00000524534 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms