RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	FBXO41	Q8TF61	875 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	TMEM169	Q96HH4	297 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	GPATCH3	Q96I76	525 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	OR14A2	Q96R54	314 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	DPYSL5	Q9BPU6	564 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	TTPAL	Q9BTX7	342 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	PHAX	Q9H814	394 aa	Known RBP	5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	CEP72	Q9P209	647 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	AKT3	Q9Y243	479 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	EMC9	Q9Y3B6	208 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	NUP160	Q12769	1436 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	USP10	Q14694	798 aa	Known RBP	5.98	□□□□□ -1.45
PCM1-223	ENST00000524356	MYOT	Q9UBF9	498 aa		5.98	□□□□□ -1.45
PCM1-223	ENST00000524356	COA3	Q9Y2R0	106 aa	Predicted RBP	5.98	□□□□□ -1.45
PCM1-223	ENST00000524356	TMA7	Q9Y2S6	64 aa	Known RBP	5.98	□□□□□ -1.45
PCM1-223	ENST00000524356	GRIN2A	Q12879	1464 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	PRDM2	Q13029	1718 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	FOXN1	O15353	648 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	RAB11FIP3	O75154	756 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	ADRA1B	P35368	520 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	VASN	Q6EMK4	673 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	METTL16	Q86W50	562 aa	Known RBP	5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	KCND1	Q9NSA2	647 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	ZFP69B	Q9UJL9	534 aa		5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.97	□□□□□ -1.45
PCM1-223	ENST00000524356	MATN2	O00339	956 aa		5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	MRPS21	P82921	87 aa	Known RBP	5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	IQCE	Q6IPM2	695 aa		5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	STPG3	Q8N7X2	389 aa		5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	PLA2G12B	Q9BX93	195 aa		5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	SLC2A4RG	Q9NR83	387 aa		5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	ADGRL1	O94910	1474 aa		5.96	□□□□□ -1.46
PCM1-223	ENST00000524356	SBNO2	Q9Y2G9	1366 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	CDC14B	O60729	498 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	FBXO21	O94952	628 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	GTF2A2	P52657	109 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	CCDC144B	Q3MJ40	725 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	ZNF568	Q3ZCX4	644 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	GTF2IRD2B	Q6EKJ0	949 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	GTF2IRD2	Q86UP8	949 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	NT5DC4	Q86YG4	428 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	NTN5	Q8WTR8	489 aa	Predicted RBP	5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	PIF1	Q9H611	641 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	CYP26B1	Q9NR63	512 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	REXO2	Q9Y3B8	237 aa	Known RBP	5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	TBX22	Q9Y458	520 aa		5.95	□□□□□ -1.46
PCM1-223	ENST00000524356	TLDC2	A0PJX2	215 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356		H0Y858	1186 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	DNAJA1	P31689	397 aa	Known RBP	5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	HIBADH	P31937	336 aa	Known RBP	5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	GJA4	P35212	333 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	ITGAE	P38570	1179 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	GLRB	P48167	497 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	FOXL1	Q12952	345 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	SKIDA1	Q1XH10	827 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	SDE2	Q6IQ49	451 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	BHLHA9	Q7RTU4	235 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	RCBTB1	Q8NDN9	531 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	DIO2	Q92813	273 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	BCL11A	Q9H165	835 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	NKX2-4	Q9H2Z4	354 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	TLR9	Q9NR96	1032 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	SLC12A7	Q9Y666	1083 aa		5.94	□□□□□ -1.46
PCM1-223	ENST00000524356	HECW2	Q9P2P5	1572 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356		A0A1W2PQH9	124 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356		H7BY64	318 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	CKM	P06732	381 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	EGFLAM	Q63HQ2	1017 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	E4F1	Q66K89	784 aa	Predicted RBP	5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	CCDC81	Q6ZN84	652 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	RPUSD2	Q8IZ73	545 aa	Known RBP	5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	TTLL11	Q8NHH1	800 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	PHOSPHO1	Q8TCT1	267 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	UBE2Q2	Q8WVN8	375 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	LGR4	Q9BXB1	951 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	CARD11	Q9BXL7	1154 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	ASH2L	Q9UBL3	628 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	ABCA10	Q8WWZ4	1543 aa		5.93	□□□□□ -1.46
PCM1-223	ENST00000524356	KDM6B	O15054	1643 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	MYO1B	O43795	1136 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	FANCC	Q00597	558 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	FSTL1	Q12841	308 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	TRIM59	Q8IWR1	403 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	BVES	Q8NE79	360 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	ZNF764	Q96H86	408 aa	Predicted RBP	5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	SMOC1	Q9H4F8	434 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	KLHL42	Q9P2K6	505 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	DIP2B	Q9P265	1576 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	SHROOM2	Q13796	1616 aa		5.92	□□□□□ -1.46
PCM1-223	ENST00000524356	ANKRD34B	A5PLL1	514 aa		5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	IL18BP	O95998	194 aa		5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	GRIN1	Q05586	938 aa		5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	ZKSCAN2	Q63HK3	967 aa		5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	POMZP3	Q6PJE2	187 aa		5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	SLC43A3	Q8NBI5	491 aa		5.91	□□□□□ -1.46
PCM1-223	ENST00000524356	TGIF2	Q9GZN2	237 aa		5.91	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms