RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 ZBTB21Q9ULJ3 1066 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 COL4A5P29400 1685 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 TLR2O60603 784 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 NR2F2P24468 414 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 POLR2FP61218 127 aaKnown RBP16.32■□□□□ 0.2
CHMP7-210ENST00000523091 KCNA1Q09470 495 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 HGSNATQ68CP4 663 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 CEP63Q96MT8 703 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 IKZF4Q9H2S9 585 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 ABCB6Q9NP58 842 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 RAB21Q9UL25 225 aa16.32■□□□□ 0.2
CHMP7-210ENST00000523091 PITPNM2Q9BZ72 1349 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 BRD3Q15059 726 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 ENOX2Q16206 610 aaKnown RBP16.31■□□□□ 0.2
CHMP7-210ENST00000523091 ZSCAN26Q16670 478 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 FOXR2Q6PJQ5 311 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 FAM151AQ8WW52 585 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 IQCDQ96DY2 449 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 GMLQ99445 158 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 PDE2AO00408 941 aaPredicted RBP16.31■□□□□ 0.2
CHMP7-210ENST00000523091 ARID5AQ03989 594 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 GPS2Q13227 327 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 TDRD12Q587J7 1177 aaKnown RBP16.31■□□□□ 0.2
CHMP7-210ENST00000523091 BEND6Q5SZJ8 279 aaPredicted RBP16.31■□□□□ 0.2
CHMP7-210ENST00000523091 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 SH2D4AQ9H788 454 aa16.31■□□□□ 0.2
CHMP7-210ENST00000523091 PIK3CDO00329 1044 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 TRIM66O15016 1216 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
CHMP7-210ENST00000523091 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 TTLL6Q8N841 843 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 STK32BQ9NY57 414 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 CYP3A4P08684 503 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 ACTN1P12814 892 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 HOXA7P31268 230 aaPredicted RBP16.3■□□□□ 0.2
CHMP7-210ENST00000523091 RASSF7Q02833 373 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
CHMP7-210ENST00000523091 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 TPH2Q8IWU9 490 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 GOPCQ9HD26 462 aa16.3■□□□□ 0.2
CHMP7-210ENST00000523091 TNS1Q9HBL0 1735 aaKnown RBP16.29■□□□□ 0.2
CHMP7-210ENST00000523091 CETN3O15182 167 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 ATP8B1O43520 1251 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 USO1O60763 962 aaKnown RBP16.29■□□□□ 0.2
CHMP7-210ENST00000523091 CHRM1P11229 460 aaPredicted RBP16.29■□□□□ 0.2
CHMP7-210ENST00000523091 MAGEA1P43355 309 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
CHMP7-210ENST00000523091 KNOP1Q1ED39 458 aaKnown RBP16.29■□□□□ 0.2
CHMP7-210ENST00000523091 OTOP1Q7RTM1 612 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 CAMKK2Q96RR4 588 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 PSMB7Q99436 277 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 CEP72Q9P209 647 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 LCMT1Q9UIC8 334 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 MYH10P35580 1976 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 CLIC2O15247 247 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 LCA5LO95447 670 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 EPM2AIP1Q7L775 607 aaPredicted RBP16.29■□□□□ 0.2
CHMP7-210ENST00000523091 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 TSGA10Q9BZW7 698 aa16.29■□□□□ 0.2
CHMP7-210ENST00000523091 SHTN1A0MZ66 631 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 SLC26A4O43511 780 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 SLITRK3O94933 977 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 GCNT3O95395 438 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 GNA14O95837 355 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 MARSP56192 900 aaKnown RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 EDRF1Q3B7T1 1238 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 LRCH2Q5VUJ6 765 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 ZC3H3Q8IXZ2 948 aaKnown RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 GEMIN8Q9NWZ8 242 aaKnown RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 COL2A1P02458 1487 aaPredicted RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 BUB1O43683 1085 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 ZMYND10O75800 440 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 DPEP1P16444 411 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 OAS2P29728 719 aaKnown RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 EPS15P42566 896 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 CASP4P49662 377 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 KSR1Q8IVT5 923 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
CHMP7-210ENST00000523091 POLR3CQ9BUI4 534 aaPredicted RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 CWC15Q9P013 229 aaKnown RBP16.28■□□□□ 0.2
CHMP7-210ENST00000523091 NCK2O43639 380 aa16.27■□□□□ 0.2
CHMP7-210ENST00000523091 AKAP3O75969 853 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms