RNA–Protein interactions for RNA: ENST00000522563.5

NSMCE2-210, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NSMCE2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-210ENST00000522563 PTCH1Q13635 1447 aa8.63□□□□□ -1.03
NSMCE2-210ENST00000522563 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
NSMCE2-210ENST00000522563 NRXN3Q9Y4C0 1643 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 TCAF2A6NFQ2 919 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 SSPNQ14714 243 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 NFE2L2Q16236 605 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 RSPO2Q6UXX9 243 aaPredicted RBP8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 JAM3Q9BX67 310 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 PTCH2Q9Y6C5 1203 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 C1orf167Q5SNV9 1468 aa8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 BLMP54132 1417 aaPredicted RBP8.62□□□□□ -1.03
NSMCE2-210ENST00000522563 METP08581 1390 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 RGPD8O14715 1765 aaPredicted RBP8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 IRS2Q9Y4H2 1338 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 SPHKAPQ2M3C7 1700 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 LOC105371045A0A1W2PR82 267 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 H7BY64 318 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 N4BP3O15049 544 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 LONRF2Q1L5Z9 754 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 C2orf27AQ580R0 203 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 LBX2Q6XYB7 198 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 RIOX2Q8IUF8 465 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 PANK1Q8TE04 598 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 THAP3Q8WTV1 239 aaPredicted RBP8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 TSPAN17Q96FV3 270 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 PEX11GQ96HA9 241 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 USP35Q9P2H5 1018 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 ADGRL3Q9HAR2 1447 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 COL22A1Q8NFW1 1626 aaPredicted RBP8.61□□□□□ -1.03
NSMCE2-210ENST00000522563 YY1P25490 414 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 MC3RP41968 323 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 GPR85P60893 370 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 KCNA10Q16322 511 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 MROH9Q5TGP6 573 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 TMEFF1Q8IYR6 380 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 ALG3Q92685 438 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 IPO9Q96P70 1041 aaKnown RBP8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 EPB41L4AQ9HCS5 686 aaPredicted RBP8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 NUDT5Q9UKK9 219 aa8.6□□□□□ -1.03
NSMCE2-210ENST00000522563 BCL9LQ86UU0 1499 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 LAMC1P11047 1609 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 ASGR2P07307 311 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 ATF2P15336 505 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 PMLP29590 882 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 LINC00310P59036 64 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 SQSTM1Q13501 440 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 DCP2Q8IU60 420 aaKnown RBP8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 UNC5CLQ8IV45 518 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 IFNL3Q8IZI9 196 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 PALD1Q9ULE6 856 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 COA3Q9Y2R0 106 aaPredicted RBP8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 GLI3P10071 1580 aa8.59□□□□□ -1.03
NSMCE2-210ENST00000522563 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 BUB1BO60566 1050 aaPredicted RBP8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 PI3P19957 117 aa8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 LIMS1P48059 325 aa8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 KRT27Q7Z3Y8 459 aa8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 PTPRN2Q92932 1015 aa8.58□□□□□ -1.04
NSMCE2-210ENST00000522563 RALGAPBQ86X10 1494 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 DBX1A6NMT0 343 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 IGFBP6P24592 240 aaPredicted RBP8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 SLC6A11P48066 632 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 R3HDM1Q15032 1099 aaKnown RBP8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 ZSWIM2Q8NEG5 633 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.57□□□□□ -1.045e-6■■■■■ 56.5
NSMCE2-210ENST00000522563 SH3TC2Q8TF17 1288 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 SEC14L1Q92503 715 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 SIGLEC10Q96LC7 697 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 KCNJ15Q99712 375 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 ZFYVE21Q9BQ24 234 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 AP5M1Q9H0R1 490 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 IPPKQ9H8X2 491 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 CNOT6Q9ULM6 557 aaKnown RBP8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 KCTD3Q9Y597 815 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 RGPD1P0DJD0 1748 aa8.57□□□□□ -1.04
NSMCE2-210ENST00000522563 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 PLCH1Q4KWH8 1693 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 COL6A2P12110 1019 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 GRK2P25098 689 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 CFPP27918 469 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 GRK3P35626 688 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 SLC9A5Q14940 896 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 MAMDC2Q7Z304 686 aaPredicted RBP8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 MILR1Q7Z6M3 343 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 C1QL4Q86Z23 238 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 SYT3Q9BQG1 590 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 EPB41L1Q9H4G0 881 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 SLC52A2Q9HAB3 445 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 PCDHA8Q9Y5H6 950 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 IRAK3Q9Y616 596 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 NUP155O75694 1391 aa8.56□□□□□ -1.04
NSMCE2-210ENST00000522563 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms