RNA–Protein interactions for RNA: ENST00000522539.1

BRF2-204, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF2, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-204ENST00000522539 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 COASYQ13057 564 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 PPFIA1Q13136 1202 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 CBX2Q14781 532 aaPredicted RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 CLUL1Q15846 466 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 GRIK4Q16099 956 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 USP17L6PQ6QN14 398 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 RSPH3Q86UC2 560 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 RTN4RL1Q86UN2 441 aaPredicted RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 NLRX1Q86UT6 975 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 CMTR2Q8IYT2 770 aaKnown RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 SMRP1Q8NCR6 262 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 MAP3K14Q99558 947 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 SPZ1Q9BXG8 430 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 RWDD1Q9H446 243 aaPredicted RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 ALG13Q9NP73 1137 aaKnown RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 ERAP1Q9NZ08 941 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 CLEC1BQ9P126 229 aa14.17□□□□□ -0.14
BRF2-204ENST00000522539 MRPL42Q9Y6G3 142 aaKnown RBP14.17□□□□□ -0.14
BRF2-204ENST00000522539 USP34Q70CQ2 3546 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 LOC730098B7Z3J9 87 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 STXBP3O00186 592 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 ITGB1P05556 798 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
BRF2-204ENST00000522539 SP4Q02446 784 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 TRDNQ13061 729 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 EFHBQ8N7U6 833 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 SPPL3Q8TCT6 385 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 IGDCC4Q8TDY8 1250 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 DNAJB3Q8WWF6 145 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 SEPT1Q8WYJ6 367 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 CDHR1Q96JP9 859 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 FTHL17Q9BXU8 183 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 PPP4R2Q9NY27 417 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 CDY2AQ9Y6F7 541 aa14.16□□□□□ -0.14
BRF2-204ENST00000522539 ERICH2A1L162 156 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 ITGB5P18084 799 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 ANTXR2P58335 489 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 WTAPQ15007 396 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 TRIM67Q6ZTA4 783 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 ADGRD2Q7Z7M1 963 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 NPAS4Q8IUM7 802 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 PRSS33Q8NF86 280 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 SMARCC2Q8TAQ2 1214 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 PCYT2Q99447 389 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 SMARCAD1Q9H4L7 1026 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 IGFLR1Q9H665 355 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 UBIAD1Q9Y5Z9 338 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 TAF6LQ9Y6J9 622 aa14.15□□□□□ -0.14
BRF2-204ENST00000522539 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
BRF2-204ENST00000522539 KIAA1671Q9BY89 1806 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 RRN3P2A6NIE6 340 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 MAFGO15525 162 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 GLP2RO95838 553 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 CD52P31358 61 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 PKN1Q16512 942 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
BRF2-204ENST00000522539 CATIPQ7Z7H3 387 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 KLHL23Q8NBE8 558 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 NCOA7Q8NI08 942 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 CUL5Q93034 780 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 PPP2R3CQ969Q6 453 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 IGSF9BQ9UPX0 1349 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 KDM3AQ9Y4C1 1321 aa14.14□□□□□ -0.15
BRF2-204ENST00000522539 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 E7EWF7 191 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 M0R296 226 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 DDAH1O94760 285 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 INSRRP14616 1297 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 MARK3P27448 753 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 NDUFV1P49821 464 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 PTH1RQ03431 593 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 SART3Q15020 963 aaKnown RBP14.13□□□□□ -0.15
BRF2-204ENST00000522539 IER5LQ5T953 404 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 IER5Q5VY09 327 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 MB21D2Q8IYB1 491 aaPredicted RBP14.13□□□□□ -0.15
BRF2-204ENST00000522539 RRP36Q96EU6 259 aaKnown RBP14.13□□□□□ -0.15
BRF2-204ENST00000522539 PHOX2BQ99453 314 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 PADI3Q9ULW8 664 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 ZDBF2Q9HCK1 2354 aa14.13□□□□□ -0.15
BRF2-204ENST00000522539 STAG3L1P0CL83 205 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 GSPT1P15170 499 aaKnown RBP14.12□□□□□ -0.15
BRF2-204ENST00000522539 PTPN5P54829 565 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 ZXDAP98168 799 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 RALYLQ86SE5 291 aaKnown RBP14.12□□□□□ -0.15
BRF2-204ENST00000522539 POF1BQ8WVV4 589 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 PIBF1Q8WXW3 757 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 SUSD6Q92537 303 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 GLG1Q92896 1179 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 ZBTB10Q96DT7 871 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 PRRX2Q99811 253 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 LZTS2Q9BRK4 669 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 MTA3Q9BTC8 594 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 TMX1Q9H3N1 280 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 LY9Q9HBG7 655 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 JADE2Q9NQC1 790 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 PCDHA2Q9Y5H9 948 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 TRPV2Q9Y5S1 764 aa14.12□□□□□ -0.15
BRF2-204ENST00000522539 CACNA1HO95180 2353 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms